Gene : Glyma.20G227200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF350 - TRANSCRIPTIONAL REGULATOR ATRX HOMOLOG Genomic Order:  2272
Name:  ? Glyma.20G227200 Secondary Identifier:  ? PAC:30519659
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G227200 0.5kb upstream 0.5kb upstream 46176 true Chr20: 46147278-46193453 Glycine max
Glyma.20G227200 0.5kb upstream 0.5kb upstream 500 false Chr20: 46147278-46147777 Glycine max
Glyma.20G227200 0.5kb downstream 0.5kb downstream 46176 true Chr20: 46147778-46193953 Glycine max
Glyma.20G227200 0.5kb downstream 0.5kb downstream 500 false Chr20: 46193454-46193953 Glycine max
Glyma.20G227200 1.0kb upstream 1.0kb upstream 46676 true Chr20: 46146778-46193453 Glycine max
Glyma.20G227200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46146778-46147777 Glycine max
Glyma.20G227200 1.0kb downstream 1.0kb downstream 46676 true Chr20: 46147778-46194453 Glycine max
Glyma.20G227200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46193454-46194453 Glycine max
Glyma.20G227200 2.0kb upstream 2.0kb upstream 47676 true Chr20: 46145778-46193453 Glycine max
Glyma.20G227200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46145778-46147777 Glycine max
Glyma.20G227200 2.0kb downstream 2.0kb downstream 47676 true Chr20: 46147778-46195453 Glycine max
Glyma.20G227200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46193454-46195453 Glycine max
Glyma.20G227200 5.0kb upstream 5.0kb upstream 50676 true Chr20: 46142778-46193453 Glycine max
Glyma.20G227200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46142778-46147777 Glycine max
Glyma.20G227200 5.0kb downstream 5.0kb downstream 50676 true Chr20: 46147778-46198453 Glycine max
Glyma.20G227200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46193454-46198453 Glycine max
Glyma.20G227200 10.0kb upstream 10.0kb upstream 55676 true Chr20: 46137778-46193453 Glycine max
Glyma.20G227200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46137778-46147777 Glycine max
Glyma.20G227200 10.0kb downstream 10.0kb downstream 55676 true Chr20: 46147778-46203453 Glycine max
Glyma.20G227200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46193454-46203453 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307297 5265 Fabidae View MSA
124061145 5270 Rosid View MSA
123747129 5271 Pentapetalae View MSA
122792246 5272 Eudicot View MSA
122043506 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.74566 0.0 36.9768    
cufflinks 7.30297 0.0 25.6346    
cufflinks 12.9683 0.0 58.316   High
cufflinks 5.64413 0.0 23.3715    
cufflinks 4.85952 0.0 21.2682    
cufflinks 4.50663 0.0 17.2736    
cufflinks 3.88181 0.0 15.8217   Low
cufflinks 6.48745 0.0 22.5177    
cufflinks 7.17371 0.0 31.5099    
cufflinks 0.201       Low
cufflinks 0.521        
cufflinks 0.376        
cufflinks 0.202       Low
cufflinks 0.216        
cufflinks 1.182       High
cufflinks 0.305        
cufflinks 0.142       Low
cufflinks 0.342        
cufflinks 0.318        
cufflinks 0.328        
cufflinks 0.664       High
cufflinks 0.363        
cufflinks 0.322        
cufflinks 0.537        
cufflinks 0.305        
cufflinks 0.35        

0 Strain