Gene : Glyma.20G191900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23244:SF321 - KELCH REPEAT-CONTAINING PROTEIN 1-RELATED Genomic Order:  1919
Name:  ? Glyma.20G191900 Secondary Identifier:  ? PAC:30521828
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G191900 0.5kb upstream 0.5kb upstream 7477 true Chr20: 43063769-43071245 Glycine max
Glyma.20G191900 0.5kb upstream 0.5kb upstream 500 false Chr20: 43063769-43064268 Glycine max
Glyma.20G191900 0.5kb downstream 0.5kb downstream 7477 true Chr20: 43064269-43071745 Glycine max
Glyma.20G191900 0.5kb downstream 0.5kb downstream 500 false Chr20: 43071246-43071745 Glycine max
Glyma.20G191900 1.0kb upstream 1.0kb upstream 7977 true Chr20: 43063269-43071245 Glycine max
Glyma.20G191900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 43063269-43064268 Glycine max
Glyma.20G191900 1.0kb downstream 1.0kb downstream 7977 true Chr20: 43064269-43072245 Glycine max
Glyma.20G191900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 43071246-43072245 Glycine max
Glyma.20G191900 2.0kb upstream 2.0kb upstream 8977 true Chr20: 43062269-43071245 Glycine max
Glyma.20G191900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 43062269-43064268 Glycine max
Glyma.20G191900 2.0kb downstream 2.0kb downstream 8977 true Chr20: 43064269-43073245 Glycine max
Glyma.20G191900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 43071246-43073245 Glycine max
Glyma.20G191900 5.0kb upstream 5.0kb upstream 11977 true Chr20: 43059269-43071245 Glycine max
Glyma.20G191900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 43059269-43064268 Glycine max
Glyma.20G191900 5.0kb downstream 5.0kb downstream 11977 true Chr20: 43064269-43076245 Glycine max
Glyma.20G191900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 43071246-43076245 Glycine max
Glyma.20G191900 10.0kb upstream 10.0kb upstream 16977 true Chr20: 43054269-43071245 Glycine max
Glyma.20G191900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 43054269-43064268 Glycine max
Glyma.20G191900 10.0kb downstream 10.0kb downstream 16977 true Chr20: 43064269-43081245 Glycine max
Glyma.20G191900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 43071246-43081245 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301624 5265 Fabidae View MSA
124061689 5270 Rosid View MSA
123737703 5271 Pentapetalae View MSA
122787027 5272 Eudicot View MSA
122042964 5273 Angiosperm View MSA
121351025 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.80775 0.0 38.3031    
cufflinks 9.50408 0.0 40.8299    
cufflinks 9.45455 0.0 40.2217    
cufflinks 13.1863 0.0 54.9717    
cufflinks 15.7984 0.0 65.8115    
cufflinks 19.0806 0.0 73.8035   High
cufflinks 6.21424 0.0 26.2327   Low
cufflinks 15.2284 0.0 57.8606    
cufflinks 9.13823 0.0 39.1475    
cufflinks 1.81       High
cufflinks 0.716       Low
cufflinks 0.906        
cufflinks 1.869       High
cufflinks 2.052       High
cufflinks 0.477       Low
cufflinks 1.099        
cufflinks 1.054        
cufflinks 1.21        
cufflinks 1.153        
cufflinks 0.91        
cufflinks 1.142        
cufflinks 1.003        
cufflinks 0.993        
cufflinks 0.908        
cufflinks 0.956        
cufflinks 1.075        

0 Strain