Gene : Glyma.20G183600 G. max Wm82.a2.v1
Defline:  (1 of 13) PF13259 - Protein of unknown function (DUF4050) (DUF4050) Genomic Order:  1836
Name:  ? Glyma.20G183600 Secondary Identifier:  ? PAC:30523387
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G183600 0.5kb upstream 0.5kb upstream 4944 true Chr20: 42167040-42171983 Glycine max
Glyma.20G183600 0.5kb upstream 0.5kb upstream 500 false Chr20: 42171484-42171983 Glycine max
Glyma.20G183600 0.5kb downstream 0.5kb downstream 4944 true Chr20: 42166540-42171483 Glycine max
Glyma.20G183600 0.5kb downstream 0.5kb downstream 500 false Chr20: 42166540-42167039 Glycine max
Glyma.20G183600 1.0kb upstream 1.0kb upstream 5444 true Chr20: 42167040-42172483 Glycine max
Glyma.20G183600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 42171484-42172483 Glycine max
Glyma.20G183600 1.0kb downstream 1.0kb downstream 5444 true Chr20: 42166040-42171483 Glycine max
Glyma.20G183600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 42166040-42167039 Glycine max
Glyma.20G183600 2.0kb upstream 2.0kb upstream 6444 true Chr20: 42167040-42173483 Glycine max
Glyma.20G183600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 42171484-42173483 Glycine max
Glyma.20G183600 2.0kb downstream 2.0kb downstream 6444 true Chr20: 42165040-42171483 Glycine max
Glyma.20G183600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 42165040-42167039 Glycine max
Glyma.20G183600 5.0kb upstream 5.0kb upstream 9444 true Chr20: 42167040-42176483 Glycine max
Glyma.20G183600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 42171484-42176483 Glycine max
Glyma.20G183600 5.0kb downstream 5.0kb downstream 9444 true Chr20: 42162040-42171483 Glycine max
Glyma.20G183600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 42162040-42167039 Glycine max
Glyma.20G183600 10.0kb upstream 10.0kb upstream 14444 true Chr20: 42167040-42181483 Glycine max
Glyma.20G183600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 42171484-42181483 Glycine max
Glyma.20G183600 10.0kb downstream 10.0kb downstream 14444 true Chr20: 42157040-42171483 Glycine max
Glyma.20G183600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 42157040-42167039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309699 5265 Fabidae View MSA
124069414 5270 Rosid View MSA
123751725 5271 Pentapetalae View MSA
122774149 5272 Eudicot View MSA
122042396 5273 Angiosperm View MSA
121349400 5274 Embryophyte View MSA
123427795 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.38962 0.0 8.40105   Low
cufflinks 7.16565 0.0 27.2995    
cufflinks 1.88292 0.0 8.10125   Low
cufflinks 8.36756 0.0 30.579    
cufflinks 9.31786 0.0 33.6703    
cufflinks 7.48006 0.0 28.9837    
cufflinks 9.11394 0.0 33.111    
cufflinks 7.36167 0.0 28.1245    
cufflinks 4.37704 0.0 19.8581    
cufflinks 1.232        
cufflinks 0.176       Low
cufflinks 0.757        
cufflinks 1.666        
cufflinks 2.201       High
cufflinks 0.224       Low
cufflinks 1.436        
cufflinks 0.266       Low
cufflinks 2.777       High
cufflinks 1.466        
cufflinks 1.114        
cufflinks 0.333       Low
cufflinks 1.181        
cufflinks 1.457        
cufflinks 0.366        
cufflinks 1.313        
cufflinks 0.376        

0 Strain