Gene : Glyma.20G150000 G. max Wm82.a2.v1
Defline:  (1 of 23) PF09425 - Divergent CCT motif (CCT_2) Genomic Order:  1500
Name:  ? Glyma.20G150000 Secondary Identifier:  ? PAC:30523296
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G150000 0.5kb upstream 0.5kb upstream 6400 true Chr20: 38901100-38907499 Glycine max
Glyma.20G150000 0.5kb upstream 0.5kb upstream 500 false Chr20: 38901100-38901599 Glycine max
Glyma.20G150000 0.5kb downstream 0.5kb downstream 6400 true Chr20: 38901600-38907999 Glycine max
Glyma.20G150000 0.5kb downstream 0.5kb downstream 500 false Chr20: 38907500-38907999 Glycine max
Glyma.20G150000 1.0kb upstream 1.0kb upstream 6900 true Chr20: 38900600-38907499 Glycine max
Glyma.20G150000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 38900600-38901599 Glycine max
Glyma.20G150000 1.0kb downstream 1.0kb downstream 6900 true Chr20: 38901600-38908499 Glycine max
Glyma.20G150000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 38907500-38908499 Glycine max
Glyma.20G150000 2.0kb upstream 2.0kb upstream 7900 true Chr20: 38899600-38907499 Glycine max
Glyma.20G150000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 38899600-38901599 Glycine max
Glyma.20G150000 2.0kb downstream 2.0kb downstream 7900 true Chr20: 38901600-38909499 Glycine max
Glyma.20G150000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 38907500-38909499 Glycine max
Glyma.20G150000 5.0kb upstream 5.0kb upstream 10900 true Chr20: 38896600-38907499 Glycine max
Glyma.20G150000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 38896600-38901599 Glycine max
Glyma.20G150000 5.0kb downstream 5.0kb downstream 10900 true Chr20: 38901600-38912499 Glycine max
Glyma.20G150000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 38907500-38912499 Glycine max
Glyma.20G150000 10.0kb upstream 10.0kb upstream 15900 true Chr20: 38891600-38907499 Glycine max
Glyma.20G150000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 38891600-38901599 Glycine max
Glyma.20G150000 10.0kb downstream 10.0kb downstream 15900 true Chr20: 38901600-38917499 Glycine max
Glyma.20G150000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 38907500-38917499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300541 5265 Fabidae View MSA
124071929 5270 Rosid View MSA
123743531 5271 Pentapetalae View MSA
122792632 5272 Eudicot View MSA
122044568 5273 Angiosperm View MSA
121310313 5274 Embryophyte View MSA
123347830 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.95853 0.0 24.6761    
cufflinks 21.36 0.0 83.6585 High High
cufflinks 9.0741 0.0 38.9999    
cufflinks 8.63183 0.0 37.0681    
cufflinks 7.63534 0.0 34.105    
cufflinks 3.27093 0.0 18.8568   Low
cufflinks 15.0814 0.0 59.2238   High
cufflinks 3.98836 0.0 18.4843    
cufflinks 3.33665 0.0 19.374   Low
cufflinks 0.243        
cufflinks 0.061       Low
cufflinks 0.885       High
cufflinks 0.294        
cufflinks 0.139        
cufflinks 0.031     Low Low
cufflinks 0.218        
cufflinks 0.156        
cufflinks 1.122       High
cufflinks 1.775       High
cufflinks 0.197        
cufflinks 0.054     Low Low
cufflinks 0.217        
cufflinks 0.365        
cufflinks 0.089        
cufflinks 0.237        
cufflinks 0.118        

0 Strain