Gene : Glyma.20G156600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24128:SF13 - E3 UBIQUITIN-PROTEIN LIGASE XBAT33 Genomic Order:  1566
Name:  ? Glyma.20G156600 Secondary Identifier:  ? PAC:30520714
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G156600 0.5kb upstream 0.5kb upstream 5698 true Chr20: 39559700-39565397 Glycine max
Glyma.20G156600 0.5kb upstream 0.5kb upstream 500 false Chr20: 39559700-39560199 Glycine max
Glyma.20G156600 0.5kb downstream 0.5kb downstream 5698 true Chr20: 39560200-39565897 Glycine max
Glyma.20G156600 0.5kb downstream 0.5kb downstream 500 false Chr20: 39565398-39565897 Glycine max
Glyma.20G156600 1.0kb upstream 1.0kb upstream 6198 true Chr20: 39559200-39565397 Glycine max
Glyma.20G156600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39559200-39560199 Glycine max
Glyma.20G156600 1.0kb downstream 1.0kb downstream 6198 true Chr20: 39560200-39566397 Glycine max
Glyma.20G156600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39565398-39566397 Glycine max
Glyma.20G156600 2.0kb upstream 2.0kb upstream 7198 true Chr20: 39558200-39565397 Glycine max
Glyma.20G156600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39558200-39560199 Glycine max
Glyma.20G156600 2.0kb downstream 2.0kb downstream 7198 true Chr20: 39560200-39567397 Glycine max
Glyma.20G156600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39565398-39567397 Glycine max
Glyma.20G156600 5.0kb upstream 5.0kb upstream 10198 true Chr20: 39555200-39565397 Glycine max
Glyma.20G156600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39555200-39560199 Glycine max
Glyma.20G156600 5.0kb downstream 5.0kb downstream 10198 true Chr20: 39560200-39570397 Glycine max
Glyma.20G156600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39565398-39570397 Glycine max
Glyma.20G156600 10.0kb upstream 10.0kb upstream 15198 true Chr20: 39550200-39565397 Glycine max
Glyma.20G156600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39550200-39560199 Glycine max
Glyma.20G156600 10.0kb downstream 10.0kb downstream 15198 true Chr20: 39560200-39575397 Glycine max
Glyma.20G156600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39565398-39575397 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311644 5265 Fabidae View MSA
124061674 5270 Rosid View MSA
123746531 5271 Pentapetalae View MSA
122792004 5272 Eudicot View MSA
122042206 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348775 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8872 0.0 49.0762    
cufflinks 8.81845 0.0 30.6101    
cufflinks 45.8412 0.0 165.211 High High
cufflinks 8.12218 0.0 28.3986    
cufflinks 8.16192 0.0 24.8098    
cufflinks 16.7973 0.0 50.1593    
cufflinks 6.88725 0.0 24.6232    
cufflinks 12.0992 0.0 41.2557    
cufflinks 8.6467 0.0 27.4271    
cufflinks 1.519        
cufflinks 2.181        
cufflinks 6.837       High
cufflinks 1.745        
cufflinks 1.005       Low
cufflinks 0.802       Low
cufflinks 2.077        
cufflinks 3.494       High
cufflinks 2.172        
cufflinks 2.965        
cufflinks 1.317        
cufflinks 2.488        
cufflinks 2.023        
cufflinks 2.407        
cufflinks 3.626       High
cufflinks 1.431        
cufflinks 2.256        

0 Strain