Gene : Glyma.20G131500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13832:SF362 - PROTEIN PHOSPHATASE 2C 63-RELATED Genomic Order:  1315
Name:  ? Glyma.20G131500 Secondary Identifier:  ? PAC:30519623
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G131500 0.5kb upstream 0.5kb upstream 3490 true Chr20: 37212906-37216395 Glycine max
Glyma.20G131500 0.5kb upstream 0.5kb upstream 500 false Chr20: 37215896-37216395 Glycine max
Glyma.20G131500 0.5kb downstream 0.5kb downstream 3490 true Chr20: 37212406-37215895 Glycine max
Glyma.20G131500 0.5kb downstream 0.5kb downstream 500 false Chr20: 37212406-37212905 Glycine max
Glyma.20G131500 1.0kb upstream 1.0kb upstream 3990 true Chr20: 37212906-37216895 Glycine max
Glyma.20G131500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 37215896-37216895 Glycine max
Glyma.20G131500 1.0kb downstream 1.0kb downstream 3990 true Chr20: 37211906-37215895 Glycine max
Glyma.20G131500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 37211906-37212905 Glycine max
Glyma.20G131500 2.0kb upstream 2.0kb upstream 4990 true Chr20: 37212906-37217895 Glycine max
Glyma.20G131500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 37215896-37217895 Glycine max
Glyma.20G131500 2.0kb downstream 2.0kb downstream 4990 true Chr20: 37210906-37215895 Glycine max
Glyma.20G131500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 37210906-37212905 Glycine max
Glyma.20G131500 5.0kb upstream 5.0kb upstream 7990 true Chr20: 37212906-37220895 Glycine max
Glyma.20G131500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 37215896-37220895 Glycine max
Glyma.20G131500 5.0kb downstream 5.0kb downstream 7990 true Chr20: 37207906-37215895 Glycine max
Glyma.20G131500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 37207906-37212905 Glycine max
Glyma.20G131500 10.0kb upstream 10.0kb upstream 12990 true Chr20: 37212906-37225895 Glycine max
Glyma.20G131500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 37215896-37225895 Glycine max
Glyma.20G131500 10.0kb downstream 10.0kb downstream 12990 true Chr20: 37202906-37215895 Glycine max
Glyma.20G131500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 37202906-37212905 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029851 5273 Angiosperm View MSA
122238388 5265 Fabidae Singleton cluster - no MSA
124066844 5270 Rosid View MSA
123747225 5271 Pentapetalae View MSA
122790095 5272 Eudicot View MSA
121299118 5274 Embryophyte View MSA
123337035 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.08123 0.0 19.6143    
cufflinks 1.69002 0.0 5.63284   Low
cufflinks 16.2859 0.0 43.4509   High
cufflinks 2.93798 0.0 9.05974    
cufflinks 3.80442 0.0 11.3062    
cufflinks 19.7581 0.0 52.789   High
cufflinks 1.59698 0.0 5.3541   Low
cufflinks 7.25531 0.0 20.0577    
cufflinks 4.00481 0.0 11.8209    
cufflinks 15.826     High  
cufflinks 33.187     High High
cufflinks 15.416     High  
cufflinks 10.865     High  
cufflinks 2.405        
cufflinks 14.296     High  
cufflinks 4.064        
cufflinks 142.495     High High
cufflinks 3.14        
cufflinks 1.99       Low
cufflinks 1.574       Low
cufflinks 19.11     High  
cufflinks 2.282       Low
cufflinks 3.752        
cufflinks 21.727     High  
cufflinks 2.248       Low
cufflinks 38.916     High High

0 Strain