Gene : Glyma.20G086500 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.7.7.49//2.7.7.7//3.1.13.2//3.1.26.13//3.4.23.16 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // // HIV-1 retropepsin / Human immunodeficiency virus type 1 protease Genomic Order:  865
Name:  ? Glyma.20G086500 Secondary Identifier:  ? PAC:30520345
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G086500 0.5kb upstream 0.5kb upstream 3449 true Chr20: 32219406-32222854 Glycine max
Glyma.20G086500 0.5kb upstream 0.5kb upstream 500 false Chr20: 32222355-32222854 Glycine max
Glyma.20G086500 0.5kb downstream 0.5kb downstream 3449 true Chr20: 32218906-32222354 Glycine max
Glyma.20G086500 0.5kb downstream 0.5kb downstream 500 false Chr20: 32218906-32219405 Glycine max
Glyma.20G086500 1.0kb upstream 1.0kb upstream 3949 true Chr20: 32219406-32223354 Glycine max
Glyma.20G086500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 32222355-32223354 Glycine max
Glyma.20G086500 1.0kb downstream 1.0kb downstream 3949 true Chr20: 32218406-32222354 Glycine max
Glyma.20G086500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 32218406-32219405 Glycine max
Glyma.20G086500 2.0kb upstream 2.0kb upstream 4949 true Chr20: 32219406-32224354 Glycine max
Glyma.20G086500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 32222355-32224354 Glycine max
Glyma.20G086500 2.0kb downstream 2.0kb downstream 4949 true Chr20: 32217406-32222354 Glycine max
Glyma.20G086500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 32217406-32219405 Glycine max
Glyma.20G086500 5.0kb upstream 5.0kb upstream 7949 true Chr20: 32219406-32227354 Glycine max
Glyma.20G086500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 32222355-32227354 Glycine max
Glyma.20G086500 5.0kb downstream 5.0kb downstream 7949 true Chr20: 32214406-32222354 Glycine max
Glyma.20G086500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 32214406-32219405 Glycine max
Glyma.20G086500 10.0kb upstream 10.0kb upstream 12949 true Chr20: 32219406-32232354 Glycine max
Glyma.20G086500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 32222355-32232354 Glycine max
Glyma.20G086500 10.0kb downstream 10.0kb downstream 12949 true Chr20: 32209406-32222354 Glycine max
Glyma.20G086500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 32209406-32219405 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122250435 5265 Fabidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00803959 0.0 0.036823 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain