Gene : Glyma.20G101200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30060 - INNER MEMBRANE PROTEIN Genomic Order:  1012
Name:  ? Glyma.20G101200 Secondary Identifier:  ? PAC:30523193
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G101200 0.5kb upstream 0.5kb upstream 3992 true Chr20: 34443022-34447013 Glycine max
Glyma.20G101200 0.5kb upstream 0.5kb upstream 500 false Chr20: 34443022-34443521 Glycine max
Glyma.20G101200 0.5kb downstream 0.5kb downstream 3992 true Chr20: 34443522-34447513 Glycine max
Glyma.20G101200 0.5kb downstream 0.5kb downstream 500 false Chr20: 34447014-34447513 Glycine max
Glyma.20G101200 1.0kb upstream 1.0kb upstream 4492 true Chr20: 34442522-34447013 Glycine max
Glyma.20G101200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34442522-34443521 Glycine max
Glyma.20G101200 1.0kb downstream 1.0kb downstream 4492 true Chr20: 34443522-34448013 Glycine max
Glyma.20G101200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34447014-34448013 Glycine max
Glyma.20G101200 2.0kb upstream 2.0kb upstream 5492 true Chr20: 34441522-34447013 Glycine max
Glyma.20G101200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34441522-34443521 Glycine max
Glyma.20G101200 2.0kb downstream 2.0kb downstream 5492 true Chr20: 34443522-34449013 Glycine max
Glyma.20G101200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34447014-34449013 Glycine max
Glyma.20G101200 5.0kb upstream 5.0kb upstream 8492 true Chr20: 34438522-34447013 Glycine max
Glyma.20G101200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34438522-34443521 Glycine max
Glyma.20G101200 5.0kb downstream 5.0kb downstream 8492 true Chr20: 34443522-34452013 Glycine max
Glyma.20G101200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34447014-34452013 Glycine max
Glyma.20G101200 10.0kb upstream 10.0kb upstream 13492 true Chr20: 34433522-34447013 Glycine max
Glyma.20G101200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34433522-34443521 Glycine max
Glyma.20G101200 10.0kb downstream 10.0kb downstream 13492 true Chr20: 34443522-34457013 Glycine max
Glyma.20G101200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34447014-34457013 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300672 5265 Fabidae View MSA
124067754 5270 Rosid View MSA
123748299 5271 Pentapetalae View MSA
122787989 5272 Eudicot View MSA
122042336 5273 Angiosperm View MSA
121346143 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.87806 0.0 24.3289    
cufflinks 9.22453 0.0 25.2017    
cufflinks 9.78728 0.0 26.6199    
cufflinks 9.19897 0.0 25.0917    
cufflinks 7.71169 0.0 21.3446   Low
cufflinks 12.2287 0.0 32.9097   High
cufflinks 9.28326 0.0 25.3675    
cufflinks 8.41474 0.0 23.0826    
cufflinks 9.10916 0.0 24.8861    
cufflinks 2.846       Low
cufflinks 5.974     High High
cufflinks 4.548        
cufflinks 3.747        
cufflinks 3.764        
cufflinks 4.174        
cufflinks 4.627        
cufflinks 3.844        
cufflinks 4.344        
cufflinks 3.743        
cufflinks 5.316        
cufflinks 5.298        
cufflinks 4.919        
cufflinks 4.206        
cufflinks 6.001       High
cufflinks 4.58        
cufflinks 4.626        

0 Strain