Gene : Glyma.20G060100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24096:SF219 - LONG CHAIN ACYL-COA SYNTHETASE 8 Genomic Order:  601
Name:  ? Glyma.20G060100 Secondary Identifier:  ? PAC:30523117
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY-321 Glycine max pathologic  
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-5143 Glycine max pathologic  
Gmax PWY-5147 Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5885 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  
Gmax PWY-6733 Glycine max pathologic  
Gmax PWY-6803 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G060100 0.5kb upstream 0.5kb upstream 12055 true Chr20: 18426690-18438744 Glycine max
Glyma.20G060100 0.5kb upstream 0.5kb upstream 500 false Chr20: 18438245-18438744 Glycine max
Glyma.20G060100 0.5kb downstream 0.5kb downstream 12055 true Chr20: 18426190-18438244 Glycine max
Glyma.20G060100 0.5kb downstream 0.5kb downstream 500 false Chr20: 18426190-18426689 Glycine max
Glyma.20G060100 1.0kb upstream 1.0kb upstream 12555 true Chr20: 18426690-18439244 Glycine max
Glyma.20G060100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 18438245-18439244 Glycine max
Glyma.20G060100 1.0kb downstream 1.0kb downstream 12555 true Chr20: 18425690-18438244 Glycine max
Glyma.20G060100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 18425690-18426689 Glycine max
Glyma.20G060100 2.0kb upstream 2.0kb upstream 13555 true Chr20: 18426690-18440244 Glycine max
Glyma.20G060100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 18438245-18440244 Glycine max
Glyma.20G060100 2.0kb downstream 2.0kb downstream 13555 true Chr20: 18424690-18438244 Glycine max
Glyma.20G060100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 18424690-18426689 Glycine max
Glyma.20G060100 5.0kb upstream 5.0kb upstream 16555 true Chr20: 18426690-18443244 Glycine max
Glyma.20G060100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 18438245-18443244 Glycine max
Glyma.20G060100 5.0kb downstream 5.0kb downstream 16555 true Chr20: 18421690-18438244 Glycine max
Glyma.20G060100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 18421690-18426689 Glycine max
Glyma.20G060100 10.0kb upstream 10.0kb upstream 21555 true Chr20: 18426690-18448244 Glycine max
Glyma.20G060100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 18438245-18448244 Glycine max
Glyma.20G060100 10.0kb downstream 10.0kb downstream 21555 true Chr20: 18416690-18438244 Glycine max
Glyma.20G060100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 18416690-18426689 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305949 5265 Fabidae View MSA
124066498 5270 Rosid View MSA
123736490 5271 Pentapetalae View MSA
122788185 5272 Eudicot View MSA
122046932 5273 Angiosperm View MSA
121348478 5274 Embryophyte View MSA
123380877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1256 0.0 57.4925    
cufflinks 11.1083 0.0 41.621   Low
cufflinks 13.5405 0.0 51.2101    
cufflinks 21.2598 0.0 84.7697 High High
cufflinks 16.46 0.0 63.0551    
cufflinks 21.6793 0.0 86.5801   High
cufflinks 18.0535 0.0 69.7313    
cufflinks 19.7627 0.0 77.5752    
cufflinks 14.5452 0.0 55.0711    
cufflinks 1.916       High
cufflinks 0.985       Low
cufflinks 1.281        
cufflinks 1.723        
cufflinks 1.441        
cufflinks 0.943       Low
cufflinks 1.351        
cufflinks 1.831        
cufflinks 1.745        
cufflinks 1.173        
cufflinks 1.397        
cufflinks 1.641        
cufflinks 1.689        
cufflinks 1.246        
cufflinks 1.444        
cufflinks 1.355        
cufflinks 2.441       High

0 Strain