Gene : Glyma.20G048000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24056:SF227 - CYCLIN-DEPENDENT KINASE C-2 Genomic Order:  480
Name:  ? Glyma.20G048000 Secondary Identifier:  ? PAC:30523450
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G048000 0.5kb upstream 0.5kb upstream 14472 true Chr20: 9106687-9121158 Glycine max
Glyma.20G048000 0.5kb upstream 0.5kb upstream 500 false Chr20: 9106687-9107186 Glycine max
Glyma.20G048000 0.5kb downstream 0.5kb downstream 14472 true Chr20: 9107187-9121658 Glycine max
Glyma.20G048000 0.5kb downstream 0.5kb downstream 500 false Chr20: 9121159-9121658 Glycine max
Glyma.20G048000 1.0kb upstream 1.0kb upstream 14972 true Chr20: 9106187-9121158 Glycine max
Glyma.20G048000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 9106187-9107186 Glycine max
Glyma.20G048000 1.0kb downstream 1.0kb downstream 14972 true Chr20: 9107187-9122158 Glycine max
Glyma.20G048000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 9121159-9122158 Glycine max
Glyma.20G048000 2.0kb upstream 2.0kb upstream 15972 true Chr20: 9105187-9121158 Glycine max
Glyma.20G048000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 9105187-9107186 Glycine max
Glyma.20G048000 2.0kb downstream 2.0kb downstream 15972 true Chr20: 9107187-9123158 Glycine max
Glyma.20G048000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 9121159-9123158 Glycine max
Glyma.20G048000 5.0kb upstream 5.0kb upstream 18972 true Chr20: 9102187-9121158 Glycine max
Glyma.20G048000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 9102187-9107186 Glycine max
Glyma.20G048000 5.0kb downstream 5.0kb downstream 18972 true Chr20: 9107187-9126158 Glycine max
Glyma.20G048000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 9121159-9126158 Glycine max
Glyma.20G048000 10.0kb upstream 10.0kb upstream 23972 true Chr20: 9097187-9121158 Glycine max
Glyma.20G048000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 9097187-9107186 Glycine max
Glyma.20G048000 10.0kb downstream 10.0kb downstream 23972 true Chr20: 9107187-9131158 Glycine max
Glyma.20G048000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 9121159-9131158 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302449 5265 Fabidae View MSA
124061566 5270 Rosid View MSA
123744751 5271 Pentapetalae View MSA
122788192 5272 Eudicot View MSA
122043728 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346780 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.77061 0.0 32.215   High
cufflinks 6.70092 0.0 25.2455    
cufflinks 3.80095 0.0 14.309   Low
cufflinks 6.45558 0.0 24.4895    
cufflinks 5.39044 0.0 17.637    
cufflinks 4.22488 0.0 17.1051   Low
cufflinks 5.45684 0.0 17.9681    
cufflinks 5.87477 0.0 23.0991    
cufflinks 4.85765 0.0 19.1935    
cufflinks 0.263        
cufflinks 0.124       Low
cufflinks 0.333        
cufflinks 0.326        
cufflinks 0.339        
cufflinks 0.17       Low
cufflinks 0.352        
cufflinks 0.17       Low
cufflinks 0.387        
cufflinks 0.4        
cufflinks 0.332        
cufflinks 0.171       Low
cufflinks 0.401       High
cufflinks 0.43       High
cufflinks 0.155       Low
cufflinks 0.337        
cufflinks 0.189        

0 Strain