Gene : Glyma.20G012600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21736:SF15 - PROTEIN OBERON 3 Genomic Order:  126
Name:  ? Glyma.20G012600 Secondary Identifier:  ? PAC:30521688
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G012600 0.5kb upstream 0.5kb upstream 4527 true Chr20: 1061784-1066310 Glycine max
Glyma.20G012600 0.5kb upstream 0.5kb upstream 500 false Chr20: 1065811-1066310 Glycine max
Glyma.20G012600 0.5kb downstream 0.5kb downstream 4527 true Chr20: 1061284-1065810 Glycine max
Glyma.20G012600 0.5kb downstream 0.5kb downstream 500 false Chr20: 1061284-1061783 Glycine max
Glyma.20G012600 1.0kb upstream 1.0kb upstream 5027 true Chr20: 1061784-1066810 Glycine max
Glyma.20G012600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 1065811-1066810 Glycine max
Glyma.20G012600 1.0kb downstream 1.0kb downstream 5027 true Chr20: 1060784-1065810 Glycine max
Glyma.20G012600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 1060784-1061783 Glycine max
Glyma.20G012600 2.0kb upstream 2.0kb upstream 6027 true Chr20: 1061784-1067810 Glycine max
Glyma.20G012600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 1065811-1067810 Glycine max
Glyma.20G012600 2.0kb downstream 2.0kb downstream 6027 true Chr20: 1059784-1065810 Glycine max
Glyma.20G012600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 1059784-1061783 Glycine max
Glyma.20G012600 5.0kb upstream 5.0kb upstream 9027 true Chr20: 1061784-1070810 Glycine max
Glyma.20G012600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 1065811-1070810 Glycine max
Glyma.20G012600 5.0kb downstream 5.0kb downstream 9027 true Chr20: 1056784-1065810 Glycine max
Glyma.20G012600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 1056784-1061783 Glycine max
Glyma.20G012600 10.0kb upstream 10.0kb upstream 14027 true Chr20: 1061784-1075810 Glycine max
Glyma.20G012600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 1065811-1075810 Glycine max
Glyma.20G012600 10.0kb downstream 10.0kb downstream 14027 true Chr20: 1051784-1065810 Glycine max
Glyma.20G012600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 1051784-1061783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255010 5265 Fabidae View MSA
123996914 5270 Rosid View MSA
123571296 5271 Pentapetalae View MSA
122606022 5272 Eudicot View MSA
122049886 5273 Angiosperm View MSA
121350320 5274 Embryophyte View MSA
123381677 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.46169 0.0 22.5747    
cufflinks 3.40831 0.0 9.48189    
cufflinks 7.10022 0.0 18.9675    
cufflinks 3.1118 0.0 8.72282    
cufflinks 4.90083 0.0 13.2833    
cufflinks 15.5086 0.0 42.1684   High
cufflinks 1.43869 0.0 4.46198   Low
cufflinks 4.87309 0.0 13.1855    
cufflinks 5.99977 0.0 16.1021    
cufflinks 16.277     High  
cufflinks 21.345     High High
cufflinks 12.931     High  
cufflinks 12.721     High  
cufflinks 4.128       Low
cufflinks 8.847     High  
cufflinks 8.455     High  
cufflinks 45.995     High High
cufflinks 7.28     High  
cufflinks 5.234       Low
cufflinks 7.289     High  
cufflinks 15.362     High  
cufflinks 7.472     High  
cufflinks 7.239        
cufflinks 16.972     High  
cufflinks 7.863     High  
cufflinks 24.987     High High

0 Strain