Gene : Glyma.19G242800 G. max Wm82.a2.v1
Defline:  (1 of 6) PF07466 - Protein of unknown function (DUF1517) (DUF1517) Genomic Order:  2428
Name:  ? Glyma.19G242800 Secondary Identifier:  ? PAC:30513053
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G242800 0.5kb upstream 0.5kb upstream 9034 true Chr19: 49040564-49049597 Glycine max
Glyma.19G242800 0.5kb upstream 0.5kb upstream 500 false Chr19: 49040564-49041063 Glycine max
Glyma.19G242800 0.5kb downstream 0.5kb downstream 9034 true Chr19: 49041064-49050097 Glycine max
Glyma.19G242800 0.5kb downstream 0.5kb downstream 500 false Chr19: 49049598-49050097 Glycine max
Glyma.19G242800 1.0kb upstream 1.0kb upstream 9534 true Chr19: 49040064-49049597 Glycine max
Glyma.19G242800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49040064-49041063 Glycine max
Glyma.19G242800 1.0kb downstream 1.0kb downstream 9534 true Chr19: 49041064-49050597 Glycine max
Glyma.19G242800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49049598-49050597 Glycine max
Glyma.19G242800 2.0kb upstream 2.0kb upstream 10534 true Chr19: 49039064-49049597 Glycine max
Glyma.19G242800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49039064-49041063 Glycine max
Glyma.19G242800 2.0kb downstream 2.0kb downstream 10534 true Chr19: 49041064-49051597 Glycine max
Glyma.19G242800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49049598-49051597 Glycine max
Glyma.19G242800 5.0kb upstream 5.0kb upstream 13534 true Chr19: 49036064-49049597 Glycine max
Glyma.19G242800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49036064-49041063 Glycine max
Glyma.19G242800 5.0kb downstream 5.0kb downstream 13534 true Chr19: 49041064-49054597 Glycine max
Glyma.19G242800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49049598-49054597 Glycine max
Glyma.19G242800 10.0kb upstream 10.0kb upstream 18534 true Chr19: 49031064-49049597 Glycine max
Glyma.19G242800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49031064-49041063 Glycine max
Glyma.19G242800 10.0kb downstream 10.0kb downstream 18534 true Chr19: 49041064-49059597 Glycine max
Glyma.19G242800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49049598-49059597 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302797 5265 Fabidae View MSA
124064193 5270 Rosid View MSA
123753168 5271 Pentapetalae View MSA
122797906 5272 Eudicot View MSA
122042227 5273 Angiosperm View MSA
123429152 5275 Viridiplantae View MSA
121348826 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.653 0.0 163.573 High High
cufflinks 12.1484 0.0 43.5591    
cufflinks 30.8652 0.0 111.284 High High
cufflinks 20.3018 0.0 71.1602 High  
cufflinks 5.31986 0.0 22.3668    
cufflinks 3.23921 0.0 10.1236   Low
cufflinks 5.92567 0.0 24.1161    
cufflinks 11.1097 0.0 40.9814    
cufflinks 4.36147 0.0 17.008    
cufflinks 0.701        
cufflinks 0.387        
cufflinks 2.374       High
cufflinks 0.573        
cufflinks 0.634        
cufflinks 0.331       Low
cufflinks 2.436       High
cufflinks 0.174       Low
cufflinks 1.572        
cufflinks 1.18        
cufflinks 3.063       High
cufflinks 0.319       Low
cufflinks 2.808       High
cufflinks 2.064        
cufflinks 0.499        
cufflinks 3.029       High
cufflinks 0.333       Low

0 Strain