Gene : Glyma.04G248500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  2485
Name:  ? Glyma.04G248500 Secondary Identifier:  ? PAC:30489597
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2724 Glycine max pathologic  
Gmax PWY-6054 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G248500 0.5kb upstream 0.5kb upstream 6488 true Chr04: 51551196-51557683 Glycine max
Glyma.04G248500 0.5kb upstream 0.5kb upstream 500 false Chr04: 51551196-51551695 Glycine max
Glyma.04G248500 0.5kb downstream 0.5kb downstream 6488 true Chr04: 51551696-51558183 Glycine max
Glyma.04G248500 0.5kb downstream 0.5kb downstream 500 false Chr04: 51557684-51558183 Glycine max
Glyma.04G248500 1.0kb upstream 1.0kb upstream 6988 true Chr04: 51550696-51557683 Glycine max
Glyma.04G248500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51550696-51551695 Glycine max
Glyma.04G248500 1.0kb downstream 1.0kb downstream 6988 true Chr04: 51551696-51558683 Glycine max
Glyma.04G248500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51557684-51558683 Glycine max
Glyma.04G248500 2.0kb upstream 2.0kb upstream 7988 true Chr04: 51549696-51557683 Glycine max
Glyma.04G248500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51549696-51551695 Glycine max
Glyma.04G248500 2.0kb downstream 2.0kb downstream 7988 true Chr04: 51551696-51559683 Glycine max
Glyma.04G248500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51557684-51559683 Glycine max
Glyma.04G248500 5.0kb upstream 5.0kb upstream 10988 true Chr04: 51546696-51557683 Glycine max
Glyma.04G248500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51546696-51551695 Glycine max
Glyma.04G248500 5.0kb downstream 5.0kb downstream 10988 true Chr04: 51551696-51562683 Glycine max
Glyma.04G248500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51557684-51562683 Glycine max
Glyma.04G248500 10.0kb upstream 10.0kb upstream 15988 true Chr04: 51541696-51557683 Glycine max
Glyma.04G248500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51541696-51551695 Glycine max
Glyma.04G248500 10.0kb downstream 10.0kb downstream 15988 true Chr04: 51551696-51567683 Glycine max
Glyma.04G248500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51557684-51567683 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296660 5265 Fabidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.09268 0.0 9.30922   Low
cufflinks 28.3978 0.0 101.775 High  
cufflinks 17.8768 0.0 61.4128    
cufflinks 16.8977 0.0 57.8006    
cufflinks 15.2313 0.0 52.0443    
cufflinks 12.0147 0.0 41.3545    
cufflinks 1.11546 0.0 7.42602   Low
cufflinks 79.6755 0.0 327.533 High High
cufflinks 9.47147 0.0 33.2261    
cufflinks 5.583       High
cufflinks 0.989        
cufflinks 4.442       High
cufflinks 0.248       Low
cufflinks 0.387       Low
cufflinks 0.368       Low
cufflinks 1.414        
cufflinks 4.72       High
cufflinks 1.674        
cufflinks 4.054       High
cufflinks 1.197        
cufflinks 1.693        
cufflinks 1.725        
cufflinks 1.84        
cufflinks 0.992        
cufflinks 1.356        
cufflinks 1.736        

0 Strain