Gene : Glyma.04G217700 G. max Wm82.a2.v1
Genomic Order:  2177 Name:  ? Glyma.04G217700
Secondary Identifier:  ? PAC:30487644
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G217700 0.5kb upstream 0.5kb upstream 1500 true Chr04: 48857334-48858833 Glycine max
Glyma.04G217700 0.5kb upstream 0.5kb upstream 500 false Chr04: 48857334-48857833 Glycine max
Glyma.04G217700 0.5kb downstream 0.5kb downstream 1500 true Chr04: 48857834-48859333 Glycine max
Glyma.04G217700 0.5kb downstream 0.5kb downstream 500 false Chr04: 48858834-48859333 Glycine max
Glyma.04G217700 1.0kb upstream 1.0kb upstream 2000 true Chr04: 48856834-48858833 Glycine max
Glyma.04G217700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48856834-48857833 Glycine max
Glyma.04G217700 1.0kb downstream 1.0kb downstream 2000 true Chr04: 48857834-48859833 Glycine max
Glyma.04G217700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48858834-48859833 Glycine max
Glyma.04G217700 2.0kb upstream 2.0kb upstream 3000 true Chr04: 48855834-48858833 Glycine max
Glyma.04G217700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48855834-48857833 Glycine max
Glyma.04G217700 2.0kb downstream 2.0kb downstream 3000 true Chr04: 48857834-48860833 Glycine max
Glyma.04G217700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48858834-48860833 Glycine max
Glyma.04G217700 5.0kb upstream 5.0kb upstream 6000 true Chr04: 48852834-48858833 Glycine max
Glyma.04G217700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48852834-48857833 Glycine max
Glyma.04G217700 5.0kb downstream 5.0kb downstream 6000 true Chr04: 48857834-48863833 Glycine max
Glyma.04G217700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48858834-48863833 Glycine max
Glyma.04G217700 10.0kb upstream 10.0kb upstream 11000 true Chr04: 48847834-48858833 Glycine max
Glyma.04G217700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48847834-48857833 Glycine max
Glyma.04G217700 10.0kb downstream 10.0kb downstream 11000 true Chr04: 48857834-48868833 Glycine max
Glyma.04G217700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48858834-48868833 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121614659 5273 Angiosperm Singleton cluster - no MSA
122249170 5265 Fabidae Singleton cluster - no MSA
123992641 5270 Rosid Singleton cluster - no MSA
123567498 5271 Pentapetalae Singleton cluster - no MSA
122602250 5272 Eudicot Singleton cluster - no MSA
120886861 5274 Embryophyte Singleton cluster - no MSA
122927625 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.465266 0.0 1.80487   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.359424 0.0 1.40871    
cufflinks 0.252299 0.0 1.00121    
cufflinks 0.027101 0.0 0.124507 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.057114 0.0 0.245985 Low  
cufflinks 0.162638 0.0 0.656094 Low  
cufflinks 0.12921 0.0 0.526404 Low  
cufflinks 0.235       High
cufflinks 0.099        
cufflinks 0.573       High
cufflinks 0.017     Low Low
cufflinks 0.079        
cufflinks 0.078        
cufflinks 0.017     Low Low
cufflinks 0.014     Low Low
cufflinks 0.13        
cufflinks 0.11        
cufflinks 0.051     Low  
cufflinks 0.046     Low  
cufflinks 0.023     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.067     Low  
cufflinks 0.048     Low  

0 Strain