Gene : Glyma.04G237400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10217:SF527 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Genomic Order:  2374
Name:  ? Glyma.04G237400 Secondary Identifier:  ? PAC:30489305
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G237400 0.5kb upstream 0.5kb upstream 8366 true Chr04: 50592418-50600783 Glycine max
Glyma.04G237400 0.5kb upstream 0.5kb upstream 500 false Chr04: 50600284-50600783 Glycine max
Glyma.04G237400 0.5kb downstream 0.5kb downstream 8366 true Chr04: 50591918-50600283 Glycine max
Glyma.04G237400 0.5kb downstream 0.5kb downstream 500 false Chr04: 50591918-50592417 Glycine max
Glyma.04G237400 1.0kb upstream 1.0kb upstream 8866 true Chr04: 50592418-50601283 Glycine max
Glyma.04G237400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50600284-50601283 Glycine max
Glyma.04G237400 1.0kb downstream 1.0kb downstream 8866 true Chr04: 50591418-50600283 Glycine max
Glyma.04G237400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50591418-50592417 Glycine max
Glyma.04G237400 2.0kb upstream 2.0kb upstream 9866 true Chr04: 50592418-50602283 Glycine max
Glyma.04G237400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50600284-50602283 Glycine max
Glyma.04G237400 2.0kb downstream 2.0kb downstream 9866 true Chr04: 50590418-50600283 Glycine max
Glyma.04G237400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50590418-50592417 Glycine max
Glyma.04G237400 5.0kb upstream 5.0kb upstream 12866 true Chr04: 50592418-50605283 Glycine max
Glyma.04G237400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50600284-50605283 Glycine max
Glyma.04G237400 5.0kb downstream 5.0kb downstream 12866 true Chr04: 50587418-50600283 Glycine max
Glyma.04G237400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50587418-50592417 Glycine max
Glyma.04G237400 10.0kb upstream 10.0kb upstream 17866 true Chr04: 50592418-50610283 Glycine max
Glyma.04G237400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50600284-50610283 Glycine max
Glyma.04G237400 10.0kb downstream 10.0kb downstream 17866 true Chr04: 50582418-50600283 Glycine max
Glyma.04G237400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50582418-50592417 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311318 5265 Fabidae View MSA
124068906 5270 Rosid View MSA
123745876 5271 Pentapetalae View MSA
122785866 5272 Eudicot View MSA
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.0464 0.0 24.8473   High
cufflinks 3.41543 0.0 13.905   Low
cufflinks 5.69402 0.0 22.9781    
cufflinks 4.35334 0.0 16.6566    
cufflinks 4.43445 0.0 16.7887    
cufflinks 4.25054 0.0 14.0695    
cufflinks 8.10296 0.0 31.4099   High
cufflinks 5.57068 0.0 20.4604    
cufflinks 4.79811 0.0 20.4803    
cufflinks 1.261       High
cufflinks 0.292       Low
cufflinks 0.898        
cufflinks 0.565        
cufflinks 0.382        
cufflinks 0.381        
cufflinks 0.676        
cufflinks 0.613        
cufflinks 1.032        
cufflinks 0.739        
cufflinks 1.302       High
cufflinks 0.297       Low
cufflinks 0.992        
cufflinks 0.823        
cufflinks 0.274       Low
cufflinks 0.949        
cufflinks 0.636        

0 Strain