Gene : Glyma.19G138700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11977:SF46 - VILLIN-2-RELATED Genomic Order:  1387
Name:  ? Glyma.19G138700 Secondary Identifier:  ? PAC:30513430
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G138700 0.5kb upstream 0.5kb upstream 13598 true Chr19: 40010487-40024084 Glycine max
Glyma.19G138700 0.5kb upstream 0.5kb upstream 500 false Chr19: 40023585-40024084 Glycine max
Glyma.19G138700 0.5kb downstream 0.5kb downstream 13598 true Chr19: 40009987-40023584 Glycine max
Glyma.19G138700 0.5kb downstream 0.5kb downstream 500 false Chr19: 40009987-40010486 Glycine max
Glyma.19G138700 1.0kb upstream 1.0kb upstream 14098 true Chr19: 40010487-40024584 Glycine max
Glyma.19G138700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40023585-40024584 Glycine max
Glyma.19G138700 1.0kb downstream 1.0kb downstream 14098 true Chr19: 40009487-40023584 Glycine max
Glyma.19G138700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40009487-40010486 Glycine max
Glyma.19G138700 2.0kb upstream 2.0kb upstream 15098 true Chr19: 40010487-40025584 Glycine max
Glyma.19G138700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40023585-40025584 Glycine max
Glyma.19G138700 2.0kb downstream 2.0kb downstream 15098 true Chr19: 40008487-40023584 Glycine max
Glyma.19G138700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40008487-40010486 Glycine max
Glyma.19G138700 5.0kb upstream 5.0kb upstream 18098 true Chr19: 40010487-40028584 Glycine max
Glyma.19G138700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40023585-40028584 Glycine max
Glyma.19G138700 5.0kb downstream 5.0kb downstream 18098 true Chr19: 40005487-40023584 Glycine max
Glyma.19G138700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40005487-40010486 Glycine max
Glyma.19G138700 10.0kb upstream 10.0kb upstream 23098 true Chr19: 40010487-40033584 Glycine max
Glyma.19G138700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40023585-40033584 Glycine max
Glyma.19G138700 10.0kb downstream 10.0kb downstream 23098 true Chr19: 40000487-40023584 Glycine max
Glyma.19G138700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40000487-40010486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311530 5265 Fabidae View MSA
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.53713 0.0 9.75097    
cufflinks 16.5417 0.0 62.0828   High
cufflinks 3.15305 0.0 9.96876    
cufflinks 8.75118 0.0 27.0693    
cufflinks 5.86053 0.0 20.1423    
cufflinks 2.26518 0.0 7.73851   Low
cufflinks 3.44347 0.0 10.8336    
cufflinks 12.847 0.0 46.0262   High
cufflinks 3.21805 0.0 10.1977    
cufflinks 5.841       High
cufflinks 0.125       Low
cufflinks 1.159        
cufflinks 1.581        
cufflinks 1.7        
cufflinks 0.036     Low Low
cufflinks 1.718        
cufflinks 0.42        
cufflinks 2.449        
cufflinks 4.005       High
cufflinks 1.234        
cufflinks 0.282        
cufflinks 1.606        
cufflinks 1.376        
cufflinks 0.098       Low
cufflinks 1.57        
cufflinks 0.364        

0 Strain