Gene : Glyma.04G018200 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  182
Name:  ? Glyma.04G018200 Secondary Identifier:  ? PAC:30487763
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G018200 0.5kb upstream 0.5kb upstream 4526 true Chr04: 1421862-1426387 Glycine max
Glyma.04G018200 0.5kb upstream 0.5kb upstream 500 false Chr04: 1425888-1426387 Glycine max
Glyma.04G018200 0.5kb downstream 0.5kb downstream 4526 true Chr04: 1421362-1425887 Glycine max
Glyma.04G018200 0.5kb downstream 0.5kb downstream 500 false Chr04: 1421362-1421861 Glycine max
Glyma.04G018200 1.0kb upstream 1.0kb upstream 5026 true Chr04: 1421862-1426887 Glycine max
Glyma.04G018200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1425888-1426887 Glycine max
Glyma.04G018200 1.0kb downstream 1.0kb downstream 5026 true Chr04: 1420862-1425887 Glycine max
Glyma.04G018200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1420862-1421861 Glycine max
Glyma.04G018200 2.0kb upstream 2.0kb upstream 6026 true Chr04: 1421862-1427887 Glycine max
Glyma.04G018200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1425888-1427887 Glycine max
Glyma.04G018200 2.0kb downstream 2.0kb downstream 6026 true Chr04: 1419862-1425887 Glycine max
Glyma.04G018200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1419862-1421861 Glycine max
Glyma.04G018200 5.0kb upstream 5.0kb upstream 9026 true Chr04: 1421862-1430887 Glycine max
Glyma.04G018200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1425888-1430887 Glycine max
Glyma.04G018200 5.0kb downstream 5.0kb downstream 9026 true Chr04: 1416862-1425887 Glycine max
Glyma.04G018200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1416862-1421861 Glycine max
Glyma.04G018200 10.0kb upstream 10.0kb upstream 14026 true Chr04: 1421862-1435887 Glycine max
Glyma.04G018200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1425888-1435887 Glycine max
Glyma.04G018200 10.0kb downstream 10.0kb downstream 14026 true Chr04: 1411862-1425887 Glycine max
Glyma.04G018200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1411862-1421861 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301351 5265 Fabidae View MSA
124062669 5270 Rosid View MSA
123739576 5271 Pentapetalae View MSA
122788055 5272 Eudicot View MSA
122047250 5273 Angiosperm View MSA
121350732 5274 Embryophyte View MSA
123426159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1312 0.0 65.8911   High
cufflinks 13.1464 0.0 52.2029   High
cufflinks 5.18013 0.0 22.9775   Low
cufflinks 8.80766 0.0 37.7722    
cufflinks 9.69464 0.0 36.5347    
cufflinks 9.21031 0.0 34.278    
cufflinks 9.60816 0.0 30.7218    
cufflinks 6.24976 0.0 25.6055    
cufflinks 5.56296 0.0 20.1444   Low
cufflinks 1.11        
cufflinks 0.256       Low
cufflinks 1.233        
cufflinks 0.982        
cufflinks 1.317        
cufflinks 0.476        
cufflinks 2.745       High
cufflinks 0.439       Low
cufflinks 1.332        
cufflinks 2.199        
cufflinks 2.626       High
cufflinks 0.408       Low
cufflinks 2.421       High
cufflinks 2.916       High
cufflinks 0.385       Low
cufflinks 2.571       High
cufflinks 0.458       Low

0 Strain