Gene : Glyma.04G050700 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11034:SF23 - N-MYC DOWNREGULATED-LIKE 3 PROTEIN Genomic Order:  507
Name:  ? Glyma.04G050700 Secondary Identifier:  ? PAC:30488748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G050700 0.5kb upstream 0.5kb upstream 4804 true Chr04: 4123995-4128798 Glycine max
Glyma.04G050700 0.5kb upstream 0.5kb upstream 500 false Chr04: 4123995-4124494 Glycine max
Glyma.04G050700 0.5kb downstream 0.5kb downstream 4804 true Chr04: 4124495-4129298 Glycine max
Glyma.04G050700 0.5kb downstream 0.5kb downstream 500 false Chr04: 4128799-4129298 Glycine max
Glyma.04G050700 1.0kb upstream 1.0kb upstream 5304 true Chr04: 4123495-4128798 Glycine max
Glyma.04G050700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4123495-4124494 Glycine max
Glyma.04G050700 1.0kb downstream 1.0kb downstream 5304 true Chr04: 4124495-4129798 Glycine max
Glyma.04G050700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4128799-4129798 Glycine max
Glyma.04G050700 2.0kb upstream 2.0kb upstream 6304 true Chr04: 4122495-4128798 Glycine max
Glyma.04G050700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4122495-4124494 Glycine max
Glyma.04G050700 2.0kb downstream 2.0kb downstream 6304 true Chr04: 4124495-4130798 Glycine max
Glyma.04G050700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4128799-4130798 Glycine max
Glyma.04G050700 5.0kb upstream 5.0kb upstream 9304 true Chr04: 4119495-4128798 Glycine max
Glyma.04G050700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4119495-4124494 Glycine max
Glyma.04G050700 5.0kb downstream 5.0kb downstream 9304 true Chr04: 4124495-4133798 Glycine max
Glyma.04G050700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4128799-4133798 Glycine max
Glyma.04G050700 10.0kb upstream 10.0kb upstream 14304 true Chr04: 4114495-4128798 Glycine max
Glyma.04G050700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4114495-4124494 Glycine max
Glyma.04G050700 10.0kb downstream 10.0kb downstream 14304 true Chr04: 4124495-4138798 Glycine max
Glyma.04G050700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4128799-4138798 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310930 5265 Fabidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.07913 0.0 12.4673    
cufflinks 4.02296 0.0 12.3004    
cufflinks 0.851692 0.0 3.07487   Low
cufflinks 12.5601 0.0 34.0109   High
cufflinks 7.01572 0.0 19.9797    
cufflinks 3.3166 0.0 10.4185    
cufflinks 1.2063 0.0 4.27395   Low
cufflinks 11.5655 0.0 31.4768   High
cufflinks 2.92972 0.0 9.35998    
cufflinks 20.0     High High
cufflinks 0.299       Low
cufflinks 1.221        
cufflinks 2.546        
cufflinks 1.243        
cufflinks 0.097       Low
cufflinks 6.249        
cufflinks 40.893     High High
cufflinks 3.5        
cufflinks 2.17        
cufflinks 3.641        
cufflinks 0.997        
cufflinks 5.318        
cufflinks 6.296        
cufflinks 0.257       Low
cufflinks 3.077        
cufflinks 2.715        

0 Strain