Gene : Glyma.04G034500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 Genomic Order:  345
Name:  ? Glyma.04G034500 Secondary Identifier:  ? PAC:30488411
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G034500 0.5kb upstream 0.5kb upstream 2385 true Chr04: 2752862-2755246 Glycine max
Glyma.04G034500 0.5kb upstream 0.5kb upstream 500 false Chr04: 2752862-2753361 Glycine max
Glyma.04G034500 0.5kb downstream 0.5kb downstream 2385 true Chr04: 2753362-2755746 Glycine max
Glyma.04G034500 0.5kb downstream 0.5kb downstream 500 false Chr04: 2755247-2755746 Glycine max
Glyma.04G034500 1.0kb upstream 1.0kb upstream 2885 true Chr04: 2752362-2755246 Glycine max
Glyma.04G034500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2752362-2753361 Glycine max
Glyma.04G034500 1.0kb downstream 1.0kb downstream 2885 true Chr04: 2753362-2756246 Glycine max
Glyma.04G034500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2755247-2756246 Glycine max
Glyma.04G034500 2.0kb upstream 2.0kb upstream 3885 true Chr04: 2751362-2755246 Glycine max
Glyma.04G034500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2751362-2753361 Glycine max
Glyma.04G034500 2.0kb downstream 2.0kb downstream 3885 true Chr04: 2753362-2757246 Glycine max
Glyma.04G034500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2755247-2757246 Glycine max
Glyma.04G034500 5.0kb upstream 5.0kb upstream 6885 true Chr04: 2748362-2755246 Glycine max
Glyma.04G034500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2748362-2753361 Glycine max
Glyma.04G034500 5.0kb downstream 5.0kb downstream 6885 true Chr04: 2753362-2760246 Glycine max
Glyma.04G034500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2755247-2760246 Glycine max
Glyma.04G034500 10.0kb upstream 10.0kb upstream 11885 true Chr04: 2743362-2755246 Glycine max
Glyma.04G034500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2743362-2753361 Glycine max
Glyma.04G034500 10.0kb downstream 10.0kb downstream 11885 true Chr04: 2753362-2765246 Glycine max
Glyma.04G034500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2755247-2765246 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303958 5265 Fabidae View MSA
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4772 0.0 47.1293    
cufflinks 8.79529 0.0 25.0876   Low
cufflinks 21.2136 0.0 56.7813 High  
cufflinks 9.88782 0.0 27.7974   Low
cufflinks 16.8324 0.0 45.4417    
cufflinks 17.2521 0.0 46.5125    
cufflinks 24.0859 0.0 64.2956 High High
cufflinks 12.3494 0.0 34.0251    
cufflinks 19.2444 0.0 51.6781    
cufflinks 28.936     High High
cufflinks 23.615     High  
cufflinks 13.995     High  
cufflinks 7.269     High  
cufflinks 4.797       Low
cufflinks 13.924     High  
cufflinks 9.665     High  
cufflinks 47.724     High High
cufflinks 10.715     High  
cufflinks 6.417       Low
cufflinks 8.434     High  
cufflinks 16.572     High  
cufflinks 8.033     High  
cufflinks 15.834     High  
cufflinks 22.746     High  
cufflinks 7.385     High  
cufflinks 20.917     High  

0 Strain