Gene : Glyma.04G075000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10410:SF6 - COP9 SIGNALOSOME COMPLEX SUBUNIT 5 Genomic Order:  750
Name:  ? Glyma.04G075000 Secondary Identifier:  ? PAC:30489619
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G075000 0.5kb upstream 0.5kb upstream 6033 true Chr04: 6269779-6275811 Glycine max
Glyma.04G075000 0.5kb upstream 0.5kb upstream 500 false Chr04: 6269779-6270278 Glycine max
Glyma.04G075000 0.5kb downstream 0.5kb downstream 6033 true Chr04: 6270279-6276311 Glycine max
Glyma.04G075000 0.5kb downstream 0.5kb downstream 500 false Chr04: 6275812-6276311 Glycine max
Glyma.04G075000 1.0kb upstream 1.0kb upstream 6533 true Chr04: 6269279-6275811 Glycine max
Glyma.04G075000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6269279-6270278 Glycine max
Glyma.04G075000 1.0kb downstream 1.0kb downstream 6533 true Chr04: 6270279-6276811 Glycine max
Glyma.04G075000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6275812-6276811 Glycine max
Glyma.04G075000 2.0kb upstream 2.0kb upstream 7533 true Chr04: 6268279-6275811 Glycine max
Glyma.04G075000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6268279-6270278 Glycine max
Glyma.04G075000 2.0kb downstream 2.0kb downstream 7533 true Chr04: 6270279-6277811 Glycine max
Glyma.04G075000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6275812-6277811 Glycine max
Glyma.04G075000 5.0kb upstream 5.0kb upstream 10533 true Chr04: 6265279-6275811 Glycine max
Glyma.04G075000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6265279-6270278 Glycine max
Glyma.04G075000 5.0kb downstream 5.0kb downstream 10533 true Chr04: 6270279-6280811 Glycine max
Glyma.04G075000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6275812-6280811 Glycine max
Glyma.04G075000 10.0kb upstream 10.0kb upstream 15533 true Chr04: 6260279-6275811 Glycine max
Glyma.04G075000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6260279-6270278 Glycine max
Glyma.04G075000 10.0kb downstream 10.0kb downstream 15533 true Chr04: 6270279-6285811 Glycine max
Glyma.04G075000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6275812-6285811 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299162 5265 Fabidae View MSA
124062385 5270 Rosid View MSA
123748125 5271 Pentapetalae View MSA
122791639 5272 Eudicot View MSA
122043693 5273 Angiosperm View MSA
121347496 5274 Embryophyte View MSA
123424807 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.538 0.0 41.7031    
cufflinks 13.7176 0.0 37.0562    
cufflinks 10.1821 0.0 28.0746   Low
cufflinks 15.654 0.0 42.0452    
cufflinks 19.9291 0.0 53.1772 High High
cufflinks 17.4524 0.0 46.6783    
cufflinks 16.9756 0.0 45.4342    
cufflinks 16.8198 0.0 45.0512    
cufflinks 16.2063 0.0 43.4336    
cufflinks 3.598        
cufflinks 2.2       Low
cufflinks 2.788        
cufflinks 4.919       High
cufflinks 4.867       High
cufflinks 3.101        
cufflinks 4.338        
cufflinks 1.684       Low
cufflinks 2.737        
cufflinks 4.141        
cufflinks 4.112        
cufflinks 2.757        
cufflinks 3.983        
cufflinks 3.358        
cufflinks 2.904        
cufflinks 4.044        
cufflinks 3.094        

0 Strain