Gene : Glyma.19G120100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21237:SF27 - GRPE PROTEIN HOMOLOG Genomic Order:  1201
Name:  ? Glyma.19G120100 Secondary Identifier:  ? PAC:30511420
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G120100 0.5kb upstream 0.5kb upstream 5557 true Chr19: 37758977-37764533 Glycine max
Glyma.19G120100 0.5kb upstream 0.5kb upstream 500 false Chr19: 37758977-37759476 Glycine max
Glyma.19G120100 0.5kb downstream 0.5kb downstream 5557 true Chr19: 37759477-37765033 Glycine max
Glyma.19G120100 0.5kb downstream 0.5kb downstream 500 false Chr19: 37764534-37765033 Glycine max
Glyma.19G120100 1.0kb upstream 1.0kb upstream 6057 true Chr19: 37758477-37764533 Glycine max
Glyma.19G120100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37758477-37759476 Glycine max
Glyma.19G120100 1.0kb downstream 1.0kb downstream 6057 true Chr19: 37759477-37765533 Glycine max
Glyma.19G120100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37764534-37765533 Glycine max
Glyma.19G120100 2.0kb upstream 2.0kb upstream 7057 true Chr19: 37757477-37764533 Glycine max
Glyma.19G120100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37757477-37759476 Glycine max
Glyma.19G120100 2.0kb downstream 2.0kb downstream 7057 true Chr19: 37759477-37766533 Glycine max
Glyma.19G120100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37764534-37766533 Glycine max
Glyma.19G120100 5.0kb upstream 5.0kb upstream 10057 true Chr19: 37754477-37764533 Glycine max
Glyma.19G120100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37754477-37759476 Glycine max
Glyma.19G120100 5.0kb downstream 5.0kb downstream 10057 true Chr19: 37759477-37769533 Glycine max
Glyma.19G120100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37764534-37769533 Glycine max
Glyma.19G120100 10.0kb upstream 10.0kb upstream 15057 true Chr19: 37749477-37764533 Glycine max
Glyma.19G120100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37749477-37759476 Glycine max
Glyma.19G120100 10.0kb downstream 10.0kb downstream 15057 true Chr19: 37759477-37774533 Glycine max
Glyma.19G120100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37764534-37774533 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301683 5265 Fabidae View MSA
124068578 5270 Rosid View MSA
123741631 5271 Pentapetalae View MSA
122792081 5272 Eudicot View MSA
122048667 5273 Angiosperm View MSA
121346760 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.3534 0.0 78.7795 High High
cufflinks 12.713 0.0 34.3414    
cufflinks 7.45658 0.0 20.9527   Low
cufflinks 14.6588 0.0 39.3483    
cufflinks 15.4184 0.0 41.333    
cufflinks 7.25489 0.0 20.4758   Low
cufflinks 15.358 0.0 41.2108    
cufflinks 12.8341 0.0 34.649    
cufflinks 10.4676 0.0 28.6081    
cufflinks 4.025        
cufflinks 1.778       Low
cufflinks 3.58        
cufflinks 3.702        
cufflinks 4.414        
cufflinks 2.555        
cufflinks 8.269     High High
cufflinks 1.97       Low
cufflinks 4.549        
cufflinks 4.485        
cufflinks 8.484     High High
cufflinks 2.321        
cufflinks 7.057        
cufflinks 9.047     High High
cufflinks 2.137       Low
cufflinks 8.416     High High
cufflinks 1.937       Low

0 Strain