Gene : Glyma.03G213400 G. max Wm82.a2.v1
Defline:  (1 of 23) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  2134
Name:  ? Glyma.03G213400 Secondary Identifier:  ? PAC:30518456
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G213400 0.5kb upstream 0.5kb upstream 1819 true Chr03: 41864580-41866398 Glycine max
Glyma.03G213400 0.5kb upstream 0.5kb upstream 500 false Chr03: 41865899-41866398 Glycine max
Glyma.03G213400 0.5kb downstream 0.5kb downstream 1819 true Chr03: 41864080-41865898 Glycine max
Glyma.03G213400 0.5kb downstream 0.5kb downstream 500 false Chr03: 41864080-41864579 Glycine max
Glyma.03G213400 1.0kb upstream 1.0kb upstream 2319 true Chr03: 41864580-41866898 Glycine max
Glyma.03G213400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41865899-41866898 Glycine max
Glyma.03G213400 1.0kb downstream 1.0kb downstream 2319 true Chr03: 41863580-41865898 Glycine max
Glyma.03G213400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41863580-41864579 Glycine max
Glyma.03G213400 2.0kb upstream 2.0kb upstream 3319 true Chr03: 41864580-41867898 Glycine max
Glyma.03G213400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41865899-41867898 Glycine max
Glyma.03G213400 2.0kb downstream 2.0kb downstream 3319 true Chr03: 41862580-41865898 Glycine max
Glyma.03G213400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41862580-41864579 Glycine max
Glyma.03G213400 5.0kb upstream 5.0kb upstream 6319 true Chr03: 41864580-41870898 Glycine max
Glyma.03G213400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41865899-41870898 Glycine max
Glyma.03G213400 5.0kb downstream 5.0kb downstream 6319 true Chr03: 41859580-41865898 Glycine max
Glyma.03G213400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41859580-41864579 Glycine max
Glyma.03G213400 10.0kb upstream 10.0kb upstream 11319 true Chr03: 41864580-41875898 Glycine max
Glyma.03G213400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41865899-41875898 Glycine max
Glyma.03G213400 10.0kb downstream 10.0kb downstream 11319 true Chr03: 41854580-41865898 Glycine max
Glyma.03G213400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41854580-41864579 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782976 5273 Angiosperm View MSA
122245242 5265 Fabidae Singleton cluster - no MSA
123989402 5270 Rosid Singleton cluster - no MSA
123754205 5271 Pentapetalae View MSA
122775601 5272 Eudicot View MSA
121054472 5274 Embryophyte View MSA
123094453 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.504539 0.0 1.8896    
cufflinks 0.320056 0.0 1.22382    
cufflinks 0.504123 0.0 1.89157    
cufflinks 0.73869 0.0 2.71655   High
cufflinks 0.254166 0.0 0.979911    
cufflinks 0.270967 0.0 1.04285 Low  
cufflinks 0.264279 0.0 1.01747    
cufflinks 0.581994 0.0 2.16503   High
cufflinks 0.257767 0.0 0.994164 Low  
cufflinks 1.808       High
cufflinks 1.036        
cufflinks 1.207        
cufflinks 0.417        
cufflinks 0.175       Low
cufflinks 0.695        
cufflinks 0.301        
cufflinks 4.863       High
cufflinks 0.663        
cufflinks 0.665        
cufflinks 0.267        
cufflinks 0.738        
cufflinks 0.212       Low
cufflinks 0.562        
cufflinks 0.97        
cufflinks 0.194       Low
cufflinks 1.41        

0 Strain