Gene : Glyma.03G257300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12786:SF1 - PROTEIN SDE2 HOMOLOG Genomic Order:  2573
Name:  ? Glyma.03G257300 Secondary Identifier:  ? PAC:30519270
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G257300 0.5kb upstream 0.5kb upstream 4012 true Chr03: 45188334-45192345 Glycine max
Glyma.03G257300 0.5kb upstream 0.5kb upstream 500 false Chr03: 45188334-45188833 Glycine max
Glyma.03G257300 0.5kb downstream 0.5kb downstream 4012 true Chr03: 45188834-45192845 Glycine max
Glyma.03G257300 0.5kb downstream 0.5kb downstream 500 false Chr03: 45192346-45192845 Glycine max
Glyma.03G257300 1.0kb upstream 1.0kb upstream 4512 true Chr03: 45187834-45192345 Glycine max
Glyma.03G257300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45187834-45188833 Glycine max
Glyma.03G257300 1.0kb downstream 1.0kb downstream 4512 true Chr03: 45188834-45193345 Glycine max
Glyma.03G257300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45192346-45193345 Glycine max
Glyma.03G257300 2.0kb upstream 2.0kb upstream 5512 true Chr03: 45186834-45192345 Glycine max
Glyma.03G257300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45186834-45188833 Glycine max
Glyma.03G257300 2.0kb downstream 2.0kb downstream 5512 true Chr03: 45188834-45194345 Glycine max
Glyma.03G257300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45192346-45194345 Glycine max
Glyma.03G257300 5.0kb upstream 5.0kb upstream 8512 true Chr03: 45183834-45192345 Glycine max
Glyma.03G257300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45183834-45188833 Glycine max
Glyma.03G257300 5.0kb downstream 5.0kb downstream 8512 true Chr03: 45188834-45197345 Glycine max
Glyma.03G257300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45192346-45197345 Glycine max
Glyma.03G257300 10.0kb upstream 10.0kb upstream 13512 true Chr03: 45178834-45192345 Glycine max
Glyma.03G257300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45178834-45188833 Glycine max
Glyma.03G257300 10.0kb downstream 10.0kb downstream 13512 true Chr03: 45188834-45202345 Glycine max
Glyma.03G257300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45192346-45202345 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299338 5265 Fabidae View MSA
124060916 5270 Rosid View MSA
123743945 5271 Pentapetalae View MSA
122790858 5272 Eudicot View MSA
122047648 5273 Angiosperm View MSA
121345169 5274 Embryophyte View MSA
123427367 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4931 0.0 38.6725   High
cufflinks 12.6726 0.0 33.8273    
cufflinks 14.1774 0.0 37.8237   High
cufflinks 9.71152 0.0 26.0703   Low
cufflinks 12.5459 0.0 33.4784    
cufflinks 12.6628 0.0 33.7925    
cufflinks 12.9212 0.0 34.4766    
cufflinks 10.2414 0.0 27.4469   Low
cufflinks 12.1768 0.0 32.5106    
cufflinks 7.092       Low
cufflinks 21.542     High High
cufflinks 9.566     High  
cufflinks 6.277       Low
cufflinks 6.273       Low
cufflinks 16.647     High  
cufflinks 13.584     High  
cufflinks 12.491     High  
cufflinks 8.117     High  
cufflinks 9.485     High  
cufflinks 15.113     High  
cufflinks 16.006     High  
cufflinks 14.203     High  
cufflinks 8.773     High  
cufflinks 18.341     High High
cufflinks 14.056     High  
cufflinks 16.444     High  

0 Strain