Gene : Glyma.04G003000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12596:SF2 - RAN-BINDING PROTEIN 16 Genomic Order:  30
Name:  ? Glyma.04G003000 Secondary Identifier:  ? PAC:30489471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G003000 0.5kb upstream 0.5kb upstream 24178 true Chr04: 232161-256338 Glycine max
Glyma.04G003000 0.5kb upstream 0.5kb upstream 500 false Chr04: 255839-256338 Glycine max
Glyma.04G003000 0.5kb downstream 0.5kb downstream 24178 true Chr04: 231661-255838 Glycine max
Glyma.04G003000 0.5kb downstream 0.5kb downstream 500 false Chr04: 231661-232160 Glycine max
Glyma.04G003000 1.0kb upstream 1.0kb upstream 24678 true Chr04: 232161-256838 Glycine max
Glyma.04G003000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 255839-256838 Glycine max
Glyma.04G003000 1.0kb downstream 1.0kb downstream 24678 true Chr04: 231161-255838 Glycine max
Glyma.04G003000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 231161-232160 Glycine max
Glyma.04G003000 2.0kb upstream 2.0kb upstream 25678 true Chr04: 232161-257838 Glycine max
Glyma.04G003000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 255839-257838 Glycine max
Glyma.04G003000 2.0kb downstream 2.0kb downstream 25678 true Chr04: 230161-255838 Glycine max
Glyma.04G003000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 230161-232160 Glycine max
Glyma.04G003000 5.0kb upstream 5.0kb upstream 28678 true Chr04: 232161-260838 Glycine max
Glyma.04G003000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 255839-260838 Glycine max
Glyma.04G003000 5.0kb downstream 5.0kb downstream 28678 true Chr04: 227161-255838 Glycine max
Glyma.04G003000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 227161-232160 Glycine max
Glyma.04G003000 10.0kb upstream 10.0kb upstream 33678 true Chr04: 232161-265838 Glycine max
Glyma.04G003000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 255839-265838 Glycine max
Glyma.04G003000 10.0kb downstream 10.0kb downstream 33678 true Chr04: 222161-255838 Glycine max
Glyma.04G003000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 222161-232160 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304945 5265 Fabidae View MSA
124066817 5270 Rosid View MSA
123737109 5271 Pentapetalae View MSA
122790636 5272 Eudicot View MSA
122043679 5273 Angiosperm View MSA
121344898 5274 Embryophyte View MSA
123423878 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.75947 0.0 27.7282    
cufflinks 4.59775 0.0 28.2724   Low
cufflinks 8.64429 0.0 43.4413   High
cufflinks 6.65979 0.0 29.8318    
cufflinks 5.7084 0.0 29.493    
cufflinks 6.08992 0.0 31.3801    
cufflinks 4.95503 0.0 31.0482   Low
cufflinks 6.5125 0.0 29.106    
cufflinks 6.92084 0.0 33.0149    
cufflinks 0.078     Low  
cufflinks 0.042     Low Low
cufflinks 0.102     Low High
cufflinks 0.09     Low High
cufflinks 0.103       High
cufflinks 0.066        
cufflinks 0.058     Low  
cufflinks 0.069        
cufflinks 0.109     Low High
cufflinks 0.076     Low  
cufflinks 0.055     Low  
cufflinks 0.052     Low Low
cufflinks 0.064     Low  
cufflinks 0.069     Low  
cufflinks 0.052     Low Low
cufflinks 0.059     Low  
cufflinks 0.06     Low  

0 Strain