Gene : Glyma.04G173500 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1103 - Predicted coiled-coil protein Genomic Order:  1735
Name:  ? Glyma.04G173500 Secondary Identifier:  ? PAC:30488077
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G173500 0.5kb upstream 0.5kb upstream 6904 true Chr04: 43478062-43484965 Glycine max
Glyma.04G173500 0.5kb upstream 0.5kb upstream 500 false Chr04: 43484466-43484965 Glycine max
Glyma.04G173500 0.5kb downstream 0.5kb downstream 6904 true Chr04: 43477562-43484465 Glycine max
Glyma.04G173500 0.5kb downstream 0.5kb downstream 500 false Chr04: 43477562-43478061 Glycine max
Glyma.04G173500 1.0kb upstream 1.0kb upstream 7404 true Chr04: 43478062-43485465 Glycine max
Glyma.04G173500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 43484466-43485465 Glycine max
Glyma.04G173500 1.0kb downstream 1.0kb downstream 7404 true Chr04: 43477062-43484465 Glycine max
Glyma.04G173500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 43477062-43478061 Glycine max
Glyma.04G173500 2.0kb upstream 2.0kb upstream 8404 true Chr04: 43478062-43486465 Glycine max
Glyma.04G173500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 43484466-43486465 Glycine max
Glyma.04G173500 2.0kb downstream 2.0kb downstream 8404 true Chr04: 43476062-43484465 Glycine max
Glyma.04G173500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 43476062-43478061 Glycine max
Glyma.04G173500 5.0kb upstream 5.0kb upstream 11404 true Chr04: 43478062-43489465 Glycine max
Glyma.04G173500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 43484466-43489465 Glycine max
Glyma.04G173500 5.0kb downstream 5.0kb downstream 11404 true Chr04: 43473062-43484465 Glycine max
Glyma.04G173500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 43473062-43478061 Glycine max
Glyma.04G173500 10.0kb upstream 10.0kb upstream 16404 true Chr04: 43478062-43494465 Glycine max
Glyma.04G173500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 43484466-43494465 Glycine max
Glyma.04G173500 10.0kb downstream 10.0kb downstream 16404 true Chr04: 43468062-43484465 Glycine max
Glyma.04G173500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 43468062-43478061 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311406 5265 Fabidae View MSA
124070003 5270 Rosid View MSA
123745248 5271 Pentapetalae View MSA
122796714 5272 Eudicot View MSA
122044193 5273 Angiosperm View MSA
121350483 5274 Embryophyte View MSA
123381752 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.973072 0.0 3.36735    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0728435 0.0 0.288359 Low Low
cufflinks 0.504683 0.0 1.83345    
cufflinks 0.845722 0.0 2.96311    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.392688 0.0 1.44709    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.38        
cufflinks 0.009     Low  
cufflinks 0.611        
cufflinks 0.21        
cufflinks 0.063        
cufflinks 0.006     Low Low
cufflinks 2.143       High
cufflinks 0.015     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.031       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 3.735       High
cufflinks 0.003     Low Low
cufflinks 2.47       High

0 Strain