Gene : Glyma.03G202500 G. max Wm82.a2.v1

Defline:  (1 of 3) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN Genomic Order:  2025
Name:  ? Glyma.03G202500 Secondary Identifier:  ? PAC:30517414

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G202500 0.5kb upstream 0.5kb upstream 1391 true Chr03: 41088937-41090327 Glycine max
Glyma.03G202500 0.5kb upstream 0.5kb upstream 500 false Chr03: 41088937-41089436 Glycine max
Glyma.03G202500 0.5kb downstream 0.5kb downstream 1391 true Chr03: 41089437-41090827 Glycine max
Glyma.03G202500 0.5kb downstream 0.5kb downstream 500 false Chr03: 41090328-41090827 Glycine max
Glyma.03G202500 1.0kb upstream 1.0kb upstream 1891 true Chr03: 41088437-41090327 Glycine max
Glyma.03G202500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41088437-41089436 Glycine max
Glyma.03G202500 1.0kb downstream 1.0kb downstream 1891 true Chr03: 41089437-41091327 Glycine max
Glyma.03G202500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41090328-41091327 Glycine max
Glyma.03G202500 2.0kb upstream 2.0kb upstream 2891 true Chr03: 41087437-41090327 Glycine max
Glyma.03G202500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41087437-41089436 Glycine max
Glyma.03G202500 2.0kb downstream 2.0kb downstream 2891 true Chr03: 41089437-41092327 Glycine max
Glyma.03G202500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41090328-41092327 Glycine max
Glyma.03G202500 5.0kb upstream 5.0kb upstream 5891 true Chr03: 41084437-41090327 Glycine max
Glyma.03G202500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41084437-41089436 Glycine max
Glyma.03G202500 5.0kb downstream 5.0kb downstream 5891 true Chr03: 41089437-41095327 Glycine max
Glyma.03G202500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41090328-41095327 Glycine max
Glyma.03G202500 10.0kb upstream 10.0kb upstream 10891 true Chr03: 41079437-41090327 Glycine max
Glyma.03G202500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41079437-41089436 Glycine max
Glyma.03G202500 10.0kb downstream 10.0kb downstream 10891 true Chr03: 41089437-41100327 Glycine max
Glyma.03G202500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41090328-41100327 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121612015 5273 Angiosperm Singleton cluster - no MSA
122245388 5265 Fabidae Singleton cluster - no MSA
123989529 5270 Rosid Singleton cluster - no MSA
123564625 5271 Pentapetalae Singleton cluster - no MSA
122599394 5272 Eudicot Singleton cluster - no MSA
120884240 5274 Embryophyte Singleton cluster - no MSA
122925044 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0281124 0.0 0.127139 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.079     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain