Gene : Glyma.03G161300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10459:SF60 - POLY [ADP-RIBOSE] POLYMERASE 1 Genomic Order:  1613
Name:  ? Glyma.03G161300 Secondary Identifier:  ? PAC:30517228
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G161300 0.5kb upstream 0.5kb upstream 9607 true Chr03: 37623765-37633371 Glycine max
Glyma.03G161300 0.5kb upstream 0.5kb upstream 500 false Chr03: 37623765-37624264 Glycine max
Glyma.03G161300 0.5kb downstream 0.5kb downstream 9607 true Chr03: 37624265-37633871 Glycine max
Glyma.03G161300 0.5kb downstream 0.5kb downstream 500 false Chr03: 37633372-37633871 Glycine max
Glyma.03G161300 1.0kb upstream 1.0kb upstream 10107 true Chr03: 37623265-37633371 Glycine max
Glyma.03G161300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37623265-37624264 Glycine max
Glyma.03G161300 1.0kb downstream 1.0kb downstream 10107 true Chr03: 37624265-37634371 Glycine max
Glyma.03G161300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37633372-37634371 Glycine max
Glyma.03G161300 2.0kb upstream 2.0kb upstream 11107 true Chr03: 37622265-37633371 Glycine max
Glyma.03G161300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37622265-37624264 Glycine max
Glyma.03G161300 2.0kb downstream 2.0kb downstream 11107 true Chr03: 37624265-37635371 Glycine max
Glyma.03G161300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37633372-37635371 Glycine max
Glyma.03G161300 5.0kb upstream 5.0kb upstream 14107 true Chr03: 37619265-37633371 Glycine max
Glyma.03G161300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37619265-37624264 Glycine max
Glyma.03G161300 5.0kb downstream 5.0kb downstream 14107 true Chr03: 37624265-37638371 Glycine max
Glyma.03G161300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37633372-37638371 Glycine max
Glyma.03G161300 10.0kb upstream 10.0kb upstream 19107 true Chr03: 37614265-37633371 Glycine max
Glyma.03G161300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37614265-37624264 Glycine max
Glyma.03G161300 10.0kb downstream 10.0kb downstream 19107 true Chr03: 37624265-37643371 Glycine max
Glyma.03G161300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37633372-37643371 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300812 5265 Fabidae View MSA
124067169 5270 Rosid View MSA
123740665 5271 Pentapetalae View MSA
122792419 5272 Eudicot View MSA
122044307 5273 Angiosperm View MSA
121344199 5274 Embryophyte View MSA
123379997 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.89201 0.0 19.3055    
cufflinks 6.2691 0.0 29.4915   High
cufflinks 1.8237 0.0 10.0393    
cufflinks 2.85139 0.0 16.225    
cufflinks 1.99148 0.0 10.7085    
cufflinks 0.961149 0.0 4.51647   Low
cufflinks 8.76559 0.0 40.3289   High
cufflinks 1.25273 0.0 6.28369    
cufflinks 1.36165 0.0 6.79087    
cufflinks 0.105       Low
cufflinks 0.159        
cufflinks 0.338        
cufflinks 0.184        
cufflinks 0.24        
cufflinks 0.152        
cufflinks 0.266        
cufflinks 0.082       Low
cufflinks 0.536       High
cufflinks 0.776       High
cufflinks 0.32        
cufflinks 0.149        
cufflinks 0.288        
cufflinks 0.212        
cufflinks 0.112       Low
cufflinks 0.236        
cufflinks 0.104       Low

0 Strain