Gene : Glyma.03G109700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13457 - BAP28 Genomic Order:  1097
Name:  ? Glyma.03G109700 Secondary Identifier:  ? PAC:30516335
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G109700 0.5kb upstream 0.5kb upstream 3015 true Chr03: 31203000-31206014 Glycine max
Glyma.03G109700 0.5kb upstream 0.5kb upstream 500 false Chr03: 31205515-31206014 Glycine max
Glyma.03G109700 0.5kb downstream 0.5kb downstream 3015 true Chr03: 31202500-31205514 Glycine max
Glyma.03G109700 0.5kb downstream 0.5kb downstream 500 false Chr03: 31202500-31202999 Glycine max
Glyma.03G109700 1.0kb upstream 1.0kb upstream 3515 true Chr03: 31203000-31206514 Glycine max
Glyma.03G109700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31205515-31206514 Glycine max
Glyma.03G109700 1.0kb downstream 1.0kb downstream 3515 true Chr03: 31202000-31205514 Glycine max
Glyma.03G109700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31202000-31202999 Glycine max
Glyma.03G109700 2.0kb upstream 2.0kb upstream 4515 true Chr03: 31203000-31207514 Glycine max
Glyma.03G109700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31205515-31207514 Glycine max
Glyma.03G109700 2.0kb downstream 2.0kb downstream 4515 true Chr03: 31201000-31205514 Glycine max
Glyma.03G109700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31201000-31202999 Glycine max
Glyma.03G109700 5.0kb upstream 5.0kb upstream 7515 true Chr03: 31203000-31210514 Glycine max
Glyma.03G109700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31205515-31210514 Glycine max
Glyma.03G109700 5.0kb downstream 5.0kb downstream 7515 true Chr03: 31198000-31205514 Glycine max
Glyma.03G109700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31198000-31202999 Glycine max
Glyma.03G109700 10.0kb upstream 10.0kb upstream 12515 true Chr03: 31203000-31215514 Glycine max
Glyma.03G109700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31205515-31215514 Glycine max
Glyma.03G109700 10.0kb downstream 10.0kb downstream 12515 true Chr03: 31193000-31205514 Glycine max
Glyma.03G109700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31193000-31202999 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121612120 5273 Angiosperm Singleton cluster - no MSA
122245547 5265 Fabidae Singleton cluster - no MSA
123989655 5270 Rosid Singleton cluster - no MSA
123564737 5271 Pentapetalae Singleton cluster - no MSA
122599506 5272 Eudicot Singleton cluster - no MSA
120884345 5274 Embryophyte Singleton cluster - no MSA
122925149 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.142342 0.0 0.573839 Low  
cufflinks 0.229034 0.0 0.90731 Low  
cufflinks 0.0541507 0.0 0.235437 Low Low
cufflinks 0.182925 0.0 0.729876    
cufflinks 0.205648 0.0 0.817287 Low  
cufflinks 0.0566392 0.0 0.246072 Low Low
cufflinks 0.381469 0.0 1.48361   High
cufflinks 0.0715888 0.0 0.303865 Low  
cufflinks 0.262193 0.0 2.00744    
cufflinks 0.057     Low  
cufflinks 0.017     Low Low
cufflinks 0.067     Low  
cufflinks 0.169       High
cufflinks 0.098       High
cufflinks 0.045     Low  
cufflinks 0.062     Low  
cufflinks 0.042     Low  
cufflinks 0.06     Low  
cufflinks 0.117       High
cufflinks 0.049     Low  
cufflinks 0.042     Low  
cufflinks 0.048     Low  
cufflinks 0.068     Low  
cufflinks 0.016     Low Low
cufflinks 0.05     Low  
cufflinks 0.03     Low  

0 Strain