Gene : Glyma.03G003000 G. max Wm82.a2.v1
Defline:  (1 of 25) PF00069//PF00954//PF01453 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) Genomic Order:  30
Name:  ? Glyma.03G003000 Secondary Identifier:  ? PAC:30516066
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G003000 0.5kb upstream 0.5kb upstream 3803 true Chr03: 281081-284883 Glycine max
Glyma.03G003000 0.5kb upstream 0.5kb upstream 500 false Chr03: 281081-281580 Glycine max
Glyma.03G003000 0.5kb downstream 0.5kb downstream 3803 true Chr03: 281581-285383 Glycine max
Glyma.03G003000 0.5kb downstream 0.5kb downstream 500 false Chr03: 284884-285383 Glycine max
Glyma.03G003000 1.0kb upstream 1.0kb upstream 4303 true Chr03: 280581-284883 Glycine max
Glyma.03G003000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 280581-281580 Glycine max
Glyma.03G003000 1.0kb downstream 1.0kb downstream 4303 true Chr03: 281581-285883 Glycine max
Glyma.03G003000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 284884-285883 Glycine max
Glyma.03G003000 2.0kb upstream 2.0kb upstream 5303 true Chr03: 279581-284883 Glycine max
Glyma.03G003000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 279581-281580 Glycine max
Glyma.03G003000 2.0kb downstream 2.0kb downstream 5303 true Chr03: 281581-286883 Glycine max
Glyma.03G003000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 284884-286883 Glycine max
Glyma.03G003000 5.0kb upstream 5.0kb upstream 8303 true Chr03: 276581-284883 Glycine max
Glyma.03G003000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 276581-281580 Glycine max
Glyma.03G003000 5.0kb downstream 5.0kb downstream 8303 true Chr03: 281581-289883 Glycine max
Glyma.03G003000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 284884-289883 Glycine max
Glyma.03G003000 10.0kb upstream 10.0kb upstream 13303 true Chr03: 271581-284883 Glycine max
Glyma.03G003000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 271581-281580 Glycine max
Glyma.03G003000 10.0kb downstream 10.0kb downstream 13303 true Chr03: 281581-294883 Glycine max
Glyma.03G003000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 284884-294883 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048151 5273 Angiosperm View MSA
122254878 5265 Fabidae View MSA
123996845 5270 Rosid View MSA
123742996 5271 Pentapetalae View MSA
122770476 5272 Eudicot View MSA
121310866 5274 Embryophyte View MSA
123348250 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.09465 0.0 11.416   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0490779 0.0 0.195384 Low  
cufflinks 0.0386726 0.0 0.155413 Low  
cufflinks 0.139432 0.0 0.533052 Low  
cufflinks 0.568948 0.0 2.01446    
cufflinks 0.0249651 0.0 0.102408 Low Low
cufflinks 0.215103 0.0 0.805908 Low  
cufflinks 0.134712 0.0 0.515626 Low  
cufflinks 1.082       High
cufflinks 0.49        
cufflinks 0.248        
cufflinks 0.981        
cufflinks 0.094        
cufflinks 0.006     Low Low
cufflinks 0.138        
cufflinks 0.333        
cufflinks 0.403        
cufflinks 0.159        
cufflinks 0.049     Low Low
cufflinks 0.215        
cufflinks 0.794        
cufflinks 0.653        
cufflinks 1.703       High
cufflinks 0.041     Low Low
cufflinks 0.858        

0 Strain