Gene : Glyma.03G255500 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  2555
Name:  ? Glyma.03G255500 Secondary Identifier:  ? PAC:30518579
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G255500 0.5kb upstream 0.5kb upstream 1716 true Chr03: 45052952-45054667 Glycine max
Glyma.03G255500 0.5kb upstream 0.5kb upstream 500 false Chr03: 45052952-45053451 Glycine max
Glyma.03G255500 0.5kb downstream 0.5kb downstream 1716 true Chr03: 45053452-45055167 Glycine max
Glyma.03G255500 0.5kb downstream 0.5kb downstream 500 false Chr03: 45054668-45055167 Glycine max
Glyma.03G255500 1.0kb upstream 1.0kb upstream 2216 true Chr03: 45052452-45054667 Glycine max
Glyma.03G255500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45052452-45053451 Glycine max
Glyma.03G255500 1.0kb downstream 1.0kb downstream 2216 true Chr03: 45053452-45055667 Glycine max
Glyma.03G255500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45054668-45055667 Glycine max
Glyma.03G255500 2.0kb upstream 2.0kb upstream 3216 true Chr03: 45051452-45054667 Glycine max
Glyma.03G255500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45051452-45053451 Glycine max
Glyma.03G255500 2.0kb downstream 2.0kb downstream 3216 true Chr03: 45053452-45056667 Glycine max
Glyma.03G255500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45054668-45056667 Glycine max
Glyma.03G255500 5.0kb upstream 5.0kb upstream 6216 true Chr03: 45048452-45054667 Glycine max
Glyma.03G255500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45048452-45053451 Glycine max
Glyma.03G255500 5.0kb downstream 5.0kb downstream 6216 true Chr03: 45053452-45059667 Glycine max
Glyma.03G255500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45054668-45059667 Glycine max
Glyma.03G255500 10.0kb upstream 10.0kb upstream 11216 true Chr03: 45043452-45054667 Glycine max
Glyma.03G255500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45043452-45053451 Glycine max
Glyma.03G255500 10.0kb downstream 10.0kb downstream 11216 true Chr03: 45053452-45064667 Glycine max
Glyma.03G255500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45054668-45064667 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254628 5265 Fabidae View MSA
124072043 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.28853 0.0 4.59483   High
cufflinks 0.140159 0.0 0.554659 Low  
cufflinks 0.0570686 0.0 0.23502 Low  
cufflinks 0.184557 0.0 0.724841 Low  
cufflinks 0.16587 0.0 0.653545 Low  
cufflinks 0.0317866 0.0 0.136902 Low  
cufflinks 0.206816 0.0 0.807525 Low  
cufflinks 0.0177276 0.0 0.0801819 Low Low
cufflinks 1.201       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.502        
cufflinks 0.013     Low Low
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.512        
cufflinks 0.036     Low Low
cufflinks 0.235        
cufflinks 0.648        
cufflinks 0.421        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.487        
cufflinks 0.46        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.362        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain