Gene : Glyma.03G213700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG1188 - WD40 repeat protein Genomic Order:  2137
Name:  ? Glyma.03G213700 Secondary Identifier:  ? PAC:30515413
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G213700 0.5kb upstream 0.5kb upstream 4527 true Chr03: 41876829-41881355 Glycine max
Glyma.03G213700 0.5kb upstream 0.5kb upstream 500 false Chr03: 41880856-41881355 Glycine max
Glyma.03G213700 0.5kb downstream 0.5kb downstream 4527 true Chr03: 41876329-41880855 Glycine max
Glyma.03G213700 0.5kb downstream 0.5kb downstream 500 false Chr03: 41876329-41876828 Glycine max
Glyma.03G213700 1.0kb upstream 1.0kb upstream 5027 true Chr03: 41876829-41881855 Glycine max
Glyma.03G213700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41880856-41881855 Glycine max
Glyma.03G213700 1.0kb downstream 1.0kb downstream 5027 true Chr03: 41875829-41880855 Glycine max
Glyma.03G213700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41875829-41876828 Glycine max
Glyma.03G213700 2.0kb upstream 2.0kb upstream 6027 true Chr03: 41876829-41882855 Glycine max
Glyma.03G213700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41880856-41882855 Glycine max
Glyma.03G213700 2.0kb downstream 2.0kb downstream 6027 true Chr03: 41874829-41880855 Glycine max
Glyma.03G213700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41874829-41876828 Glycine max
Glyma.03G213700 5.0kb upstream 5.0kb upstream 9027 true Chr03: 41876829-41885855 Glycine max
Glyma.03G213700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41880856-41885855 Glycine max
Glyma.03G213700 5.0kb downstream 5.0kb downstream 9027 true Chr03: 41871829-41880855 Glycine max
Glyma.03G213700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41871829-41876828 Glycine max
Glyma.03G213700 10.0kb upstream 10.0kb upstream 14027 true Chr03: 41876829-41890855 Glycine max
Glyma.03G213700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41880856-41890855 Glycine max
Glyma.03G213700 10.0kb downstream 10.0kb downstream 14027 true Chr03: 41866829-41880855 Glycine max
Glyma.03G213700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41866829-41876828 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300699 5265 Fabidae View MSA
124068228 5270 Rosid View MSA
123738584 5271 Pentapetalae View MSA
122788680 5272 Eudicot View MSA
122044076 5273 Angiosperm View MSA
121344334 5274 Embryophyte View MSA
123425104 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.61702 0.0 14.3026    
cufflinks 3.21179 0.0 13.6391    
cufflinks 1.49264 0.0 5.99296   Low
cufflinks 2.75674 0.0 12.3931    
cufflinks 2.92942 0.0 13.1688    
cufflinks 1.66912 0.0 9.61436   Low
cufflinks 4.37459 0.0 23.9641   High
cufflinks 2.41916 0.0 11.6249    
cufflinks 3.17906 0.0 13.6019    
cufflinks 0.288        
cufflinks 0.085       Low
cufflinks 0.553        
cufflinks 0.652       High
cufflinks 0.826       High
cufflinks 0.163        
cufflinks 0.368        
cufflinks 0.157        
cufflinks 0.612       High
cufflinks 0.587        
cufflinks 0.296        
cufflinks 0.1       Low
cufflinks 0.336        
cufflinks 0.493        
cufflinks 0.076       Low
cufflinks 0.323        
cufflinks 0.156        

0 Strain