Gene : Glyma.03G063900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Genomic Order:  639
Name:  ? Glyma.03G063900 Secondary Identifier:  ? PAC:30518151
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G063900 0.5kb upstream 0.5kb upstream 6983 true Chr03: 10258579-10265561 Glycine max
Glyma.03G063900 0.5kb upstream 0.5kb upstream 500 false Chr03: 10265062-10265561 Glycine max
Glyma.03G063900 0.5kb downstream 0.5kb downstream 6983 true Chr03: 10258079-10265061 Glycine max
Glyma.03G063900 0.5kb downstream 0.5kb downstream 500 false Chr03: 10258079-10258578 Glycine max
Glyma.03G063900 1.0kb upstream 1.0kb upstream 7483 true Chr03: 10258579-10266061 Glycine max
Glyma.03G063900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10265062-10266061 Glycine max
Glyma.03G063900 1.0kb downstream 1.0kb downstream 7483 true Chr03: 10257579-10265061 Glycine max
Glyma.03G063900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10257579-10258578 Glycine max
Glyma.03G063900 2.0kb upstream 2.0kb upstream 8483 true Chr03: 10258579-10267061 Glycine max
Glyma.03G063900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10265062-10267061 Glycine max
Glyma.03G063900 2.0kb downstream 2.0kb downstream 8483 true Chr03: 10256579-10265061 Glycine max
Glyma.03G063900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10256579-10258578 Glycine max
Glyma.03G063900 5.0kb upstream 5.0kb upstream 11483 true Chr03: 10258579-10270061 Glycine max
Glyma.03G063900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10265062-10270061 Glycine max
Glyma.03G063900 5.0kb downstream 5.0kb downstream 11483 true Chr03: 10253579-10265061 Glycine max
Glyma.03G063900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10253579-10258578 Glycine max
Glyma.03G063900 10.0kb upstream 10.0kb upstream 16483 true Chr03: 10258579-10275061 Glycine max
Glyma.03G063900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10265062-10275061 Glycine max
Glyma.03G063900 10.0kb downstream 10.0kb downstream 16483 true Chr03: 10248579-10265061 Glycine max
Glyma.03G063900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10248579-10258578 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656526 5273 Angiosperm View MSA
122298823 5265 Fabidae View MSA
124036613 5270 Rosid View MSA
123609914 5271 Pentapetalae View MSA
122644552 5272 Eudicot View MSA
120928599 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.326544 0.0 1.22672    
cufflinks 1.70769 0.0 5.67256    
cufflinks 0.0908452 0.0 0.359506 Low Low
cufflinks 3.2167 0.0 9.75224    
cufflinks 25.9305 0.0 69.9534 High High
cufflinks 3.71676 0.0 11.0414    
cufflinks 0.11684 0.0 0.45836 Low Low
cufflinks 14.3344 0.0 38.2714   High
cufflinks 3.35497 0.0 10.1127    
cufflinks 7.885     High High
cufflinks 0.029     Low Low
cufflinks 0.025     Low Low
cufflinks 3.167       High
cufflinks 12.218     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.86        
cufflinks 0.112        
cufflinks 0.187        
cufflinks 0.057     Low  
cufflinks 0.317        
cufflinks 0.164        
cufflinks 0.637        
cufflinks 0.169        
cufflinks 0.015     Low Low
cufflinks 0.943        
cufflinks 0.415        

0 Strain