Gene : Glyma.03G065700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31636:SF14 - SCARECROW-LIKE PROTEIN 9 Genomic Order:  657
Name:  ? Glyma.03G065700 Secondary Identifier:  ? PAC:30519240
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G065700 0.5kb upstream 0.5kb upstream 13808 true Chr03: 11896038-11909845 Glycine max
Glyma.03G065700 0.5kb upstream 0.5kb upstream 500 false Chr03: 11896038-11896537 Glycine max
Glyma.03G065700 0.5kb downstream 0.5kb downstream 13808 true Chr03: 11896538-11910345 Glycine max
Glyma.03G065700 0.5kb downstream 0.5kb downstream 500 false Chr03: 11909846-11910345 Glycine max
Glyma.03G065700 1.0kb upstream 1.0kb upstream 14308 true Chr03: 11895538-11909845 Glycine max
Glyma.03G065700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11895538-11896537 Glycine max
Glyma.03G065700 1.0kb downstream 1.0kb downstream 14308 true Chr03: 11896538-11910845 Glycine max
Glyma.03G065700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11909846-11910845 Glycine max
Glyma.03G065700 2.0kb upstream 2.0kb upstream 15308 true Chr03: 11894538-11909845 Glycine max
Glyma.03G065700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11894538-11896537 Glycine max
Glyma.03G065700 2.0kb downstream 2.0kb downstream 15308 true Chr03: 11896538-11911845 Glycine max
Glyma.03G065700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11909846-11911845 Glycine max
Glyma.03G065700 5.0kb upstream 5.0kb upstream 18308 true Chr03: 11891538-11909845 Glycine max
Glyma.03G065700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11891538-11896537 Glycine max
Glyma.03G065700 5.0kb downstream 5.0kb downstream 18308 true Chr03: 11896538-11914845 Glycine max
Glyma.03G065700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11909846-11914845 Glycine max
Glyma.03G065700 10.0kb upstream 10.0kb upstream 23308 true Chr03: 11886538-11909845 Glycine max
Glyma.03G065700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11886538-11896537 Glycine max
Glyma.03G065700 10.0kb downstream 10.0kb downstream 23308 true Chr03: 11896538-11919845 Glycine max
Glyma.03G065700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11909846-11919845 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309527 5265 Fabidae View MSA
124071892 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.329723 0.0 2.00904    
cufflinks 0.294789 0.0 1.91399    
cufflinks 0.78392 0.0 4.06611    
cufflinks 0.343978 0.0 2.1608    
cufflinks 1.41001 0.0 6.45841    
cufflinks 1.77679 0.0 7.49484    
cufflinks 2.28171 0.0 8.98924   High
cufflinks 0.116147 0.0 0.566363 Low Low
cufflinks 1.29901 0.0 5.89866    
cufflinks 0.021     Low Low
cufflinks 0.025     Low Low
cufflinks 0.244       High
cufflinks 0.593       High
cufflinks 0.666       High
cufflinks 0.114        
cufflinks 0.055     Low  
cufflinks 0.074        
cufflinks 0.213        
cufflinks 0.086     Low  
cufflinks 0.048     Low  
cufflinks 0.037     Low  
cufflinks 0.038     Low  
cufflinks 0.043     Low  
cufflinks 0.024     Low Low
cufflinks 0.058     Low  
cufflinks 0.059     Low  

0 Strain