Gene : Glyma.02G257900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34945:SF1 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  2579
Name:  ? Glyma.02G257900 Secondary Identifier:  ? PAC:30508707
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G257900 0.5kb upstream 0.5kb upstream 3548 true Chr02: 44447225-44450772 Glycine max
Glyma.02G257900 0.5kb upstream 0.5kb upstream 500 false Chr02: 44447225-44447724 Glycine max
Glyma.02G257900 0.5kb downstream 0.5kb downstream 3548 true Chr02: 44447725-44451272 Glycine max
Glyma.02G257900 0.5kb downstream 0.5kb downstream 500 false Chr02: 44450773-44451272 Glycine max
Glyma.02G257900 1.0kb upstream 1.0kb upstream 4048 true Chr02: 44446725-44450772 Glycine max
Glyma.02G257900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44446725-44447724 Glycine max
Glyma.02G257900 1.0kb downstream 1.0kb downstream 4048 true Chr02: 44447725-44451772 Glycine max
Glyma.02G257900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44450773-44451772 Glycine max
Glyma.02G257900 2.0kb upstream 2.0kb upstream 5048 true Chr02: 44445725-44450772 Glycine max
Glyma.02G257900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44445725-44447724 Glycine max
Glyma.02G257900 2.0kb downstream 2.0kb downstream 5048 true Chr02: 44447725-44452772 Glycine max
Glyma.02G257900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44450773-44452772 Glycine max
Glyma.02G257900 5.0kb upstream 5.0kb upstream 8048 true Chr02: 44442725-44450772 Glycine max
Glyma.02G257900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44442725-44447724 Glycine max
Glyma.02G257900 5.0kb downstream 5.0kb downstream 8048 true Chr02: 44447725-44455772 Glycine max
Glyma.02G257900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44450773-44455772 Glycine max
Glyma.02G257900 10.0kb upstream 10.0kb upstream 13048 true Chr02: 44437725-44450772 Glycine max
Glyma.02G257900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44437725-44447724 Glycine max
Glyma.02G257900 10.0kb downstream 10.0kb downstream 13048 true Chr02: 44447725-44460772 Glycine max
Glyma.02G257900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44450773-44460772 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299723 5265 Fabidae View MSA
124063750 5270 Rosid View MSA
123740513 5271 Pentapetalae View MSA
122786600 5272 Eudicot View MSA
122046716 5273 Angiosperm View MSA
121310645 5274 Embryophyte View MSA
123348077 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.23694 0.0 10.7757   Low
cufflinks 8.09213 0.0 30.9644    
cufflinks 7.35338 0.0 28.6995    
cufflinks 5.2446 0.0 22.6366    
cufflinks 9.342 0.0 34.4108    
cufflinks 7.31584 0.0 24.9942    
cufflinks 7.51989 0.0 25.7098    
cufflinks 9.39603 0.0 35.3448   High
cufflinks 4.31153 0.0 17.0977   Low
cufflinks 1.384        
cufflinks 1.016        
cufflinks 1.521        
cufflinks 1.542        
cufflinks 1.58        
cufflinks 0.912        
cufflinks 0.305       Low
cufflinks 1.323        
cufflinks 0.443       Low
cufflinks 1.456        
cufflinks 0.474       Low
cufflinks 1.119        
cufflinks 0.362       Low
cufflinks 0.632        
cufflinks 1.393        
cufflinks 0.476       Low
cufflinks 1.372        

0 Strain