Gene : Glyma.02G251700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22851 - U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN Genomic Order:  2517
Name:  ? Glyma.02G251700 Secondary Identifier:  ? PAC:30509337
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G251700 0.5kb upstream 0.5kb upstream 6721 true Chr02: 43886581-43893301 Glycine max
Glyma.02G251700 0.5kb upstream 0.5kb upstream 500 false Chr02: 43886581-43887080 Glycine max
Glyma.02G251700 0.5kb downstream 0.5kb downstream 6721 true Chr02: 43887081-43893801 Glycine max
Glyma.02G251700 0.5kb downstream 0.5kb downstream 500 false Chr02: 43893302-43893801 Glycine max
Glyma.02G251700 1.0kb upstream 1.0kb upstream 7221 true Chr02: 43886081-43893301 Glycine max
Glyma.02G251700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43886081-43887080 Glycine max
Glyma.02G251700 1.0kb downstream 1.0kb downstream 7221 true Chr02: 43887081-43894301 Glycine max
Glyma.02G251700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43893302-43894301 Glycine max
Glyma.02G251700 2.0kb upstream 2.0kb upstream 8221 true Chr02: 43885081-43893301 Glycine max
Glyma.02G251700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43885081-43887080 Glycine max
Glyma.02G251700 2.0kb downstream 2.0kb downstream 8221 true Chr02: 43887081-43895301 Glycine max
Glyma.02G251700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43893302-43895301 Glycine max
Glyma.02G251700 5.0kb upstream 5.0kb upstream 11221 true Chr02: 43882081-43893301 Glycine max
Glyma.02G251700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43882081-43887080 Glycine max
Glyma.02G251700 5.0kb downstream 5.0kb downstream 11221 true Chr02: 43887081-43898301 Glycine max
Glyma.02G251700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43893302-43898301 Glycine max
Glyma.02G251700 10.0kb upstream 10.0kb upstream 16221 true Chr02: 43877081-43893301 Glycine max
Glyma.02G251700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43877081-43887080 Glycine max
Glyma.02G251700 10.0kb downstream 10.0kb downstream 16221 true Chr02: 43887081-43903301 Glycine max
Glyma.02G251700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43893302-43903301 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304070 5265 Fabidae View MSA
124063695 5270 Rosid View MSA
123748291 5271 Pentapetalae View MSA
122792543 5272 Eudicot View MSA
122047654 5273 Angiosperm View MSA
121347160 5274 Embryophyte View MSA
123425121 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.369 0.0 62.6088 High High
cufflinks 16.582 0.0 44.2476    
cufflinks 9.89368 0.0 26.7925   Low
cufflinks 13.2184 0.0 35.4056    
cufflinks 20.8436 0.0 55.6904 High  
cufflinks 11.6211 0.0 31.265   Low
cufflinks 18.3059 0.0 48.8399    
cufflinks 13.7434 0.0 36.7789    
cufflinks 21.302 0.0 56.9409 High  
cufflinks 2.854        
cufflinks 1.953       Low
cufflinks 4.468        
cufflinks 6.813       High
cufflinks 10.203     High High
cufflinks 3.154        
cufflinks 3.87        
cufflinks 2.918        
cufflinks 4.262        
cufflinks 5.553        
cufflinks 2.776        
cufflinks 2.496        
cufflinks 3.73        
cufflinks 4.493        
cufflinks 2.427       Low
cufflinks 4.075        
cufflinks 2.762        

0 Strain