Gene : Glyma.02G248400 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR21596:SF25 - TRANSCRIPTION REGULATOR-LIKE-RELATED Genomic Order:  2484
Name:  ? Glyma.02G248400 Secondary Identifier:  ? PAC:30508668
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G248400 0.5kb upstream 0.5kb upstream 9145 true Chr02: 43576952-43586096 Glycine max
Glyma.02G248400 0.5kb upstream 0.5kb upstream 500 false Chr02: 43576952-43577451 Glycine max
Glyma.02G248400 0.5kb downstream 0.5kb downstream 9145 true Chr02: 43577452-43586596 Glycine max
Glyma.02G248400 0.5kb downstream 0.5kb downstream 500 false Chr02: 43586097-43586596 Glycine max
Glyma.02G248400 1.0kb upstream 1.0kb upstream 9645 true Chr02: 43576452-43586096 Glycine max
Glyma.02G248400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43576452-43577451 Glycine max
Glyma.02G248400 1.0kb downstream 1.0kb downstream 9645 true Chr02: 43577452-43587096 Glycine max
Glyma.02G248400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43586097-43587096 Glycine max
Glyma.02G248400 2.0kb upstream 2.0kb upstream 10645 true Chr02: 43575452-43586096 Glycine max
Glyma.02G248400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43575452-43577451 Glycine max
Glyma.02G248400 2.0kb downstream 2.0kb downstream 10645 true Chr02: 43577452-43588096 Glycine max
Glyma.02G248400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43586097-43588096 Glycine max
Glyma.02G248400 5.0kb upstream 5.0kb upstream 13645 true Chr02: 43572452-43586096 Glycine max
Glyma.02G248400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43572452-43577451 Glycine max
Glyma.02G248400 5.0kb downstream 5.0kb downstream 13645 true Chr02: 43577452-43591096 Glycine max
Glyma.02G248400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43586097-43591096 Glycine max
Glyma.02G248400 10.0kb upstream 10.0kb upstream 18645 true Chr02: 43567452-43586096 Glycine max
Glyma.02G248400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43567452-43577451 Glycine max
Glyma.02G248400 10.0kb downstream 10.0kb downstream 18645 true Chr02: 43577452-43596096 Glycine max
Glyma.02G248400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43586097-43596096 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297480 5265 Fabidae View MSA
124040362 5270 Rosid View MSA
123744148 5271 Pentapetalae View MSA
122770917 5272 Eudicot View MSA
122047890 5273 Angiosperm View MSA
121350157 5274 Embryophyte View MSA
123381596 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1152 0.0 7.00532    
cufflinks 2.52691 0.0 8.35602    
cufflinks 1.38479 0.0 6.4771    
cufflinks 3.23285 0.0 10.1251    
cufflinks 1.61815 0.0 6.34269    
cufflinks 1.07922 0.0 4.56744   Low
cufflinks 5.88963 0.0 21.3657   High
cufflinks 1.27005 0.0 6.22991    
cufflinks 2.44007 0.0 9.70907    
cufflinks 0.31        
cufflinks 0.084       Low
cufflinks 0.694       High
cufflinks 0.361        
cufflinks 0.373        
cufflinks 0.248        
cufflinks 0.594        
cufflinks 0.095       Low
cufflinks 1.036       High
cufflinks 0.667        
cufflinks 0.452        
cufflinks 0.157       Low
cufflinks 0.541        
cufflinks 0.449        
cufflinks 0.174        
cufflinks 0.528        
cufflinks 0.18        

0 Strain