Gene : Glyma.02G302300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21716 - TRANSMEMBRANE PROTEIN Genomic Order:  3023
Name:  ? Glyma.02G302300 Secondary Identifier:  ? PAC:30510758
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G302300 0.5kb upstream 0.5kb upstream 3458 true Chr02: 47780261-47783718 Glycine max
Glyma.02G302300 0.5kb upstream 0.5kb upstream 500 false Chr02: 47780261-47780760 Glycine max
Glyma.02G302300 0.5kb downstream 0.5kb downstream 3458 true Chr02: 47780761-47784218 Glycine max
Glyma.02G302300 0.5kb downstream 0.5kb downstream 500 false Chr02: 47783719-47784218 Glycine max
Glyma.02G302300 1.0kb upstream 1.0kb upstream 3958 true Chr02: 47779761-47783718 Glycine max
Glyma.02G302300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47779761-47780760 Glycine max
Glyma.02G302300 1.0kb downstream 1.0kb downstream 3958 true Chr02: 47780761-47784718 Glycine max
Glyma.02G302300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47783719-47784718 Glycine max
Glyma.02G302300 2.0kb upstream 2.0kb upstream 4958 true Chr02: 47778761-47783718 Glycine max
Glyma.02G302300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47778761-47780760 Glycine max
Glyma.02G302300 2.0kb downstream 2.0kb downstream 4958 true Chr02: 47780761-47785718 Glycine max
Glyma.02G302300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47783719-47785718 Glycine max
Glyma.02G302300 5.0kb upstream 5.0kb upstream 7958 true Chr02: 47775761-47783718 Glycine max
Glyma.02G302300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47775761-47780760 Glycine max
Glyma.02G302300 5.0kb downstream 5.0kb downstream 7958 true Chr02: 47780761-47788718 Glycine max
Glyma.02G302300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47783719-47788718 Glycine max
Glyma.02G302300 10.0kb upstream 10.0kb upstream 12958 true Chr02: 47770761-47783718 Glycine max
Glyma.02G302300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47770761-47780760 Glycine max
Glyma.02G302300 10.0kb downstream 10.0kb downstream 12958 true Chr02: 47780761-47793718 Glycine max
Glyma.02G302300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47783719-47793718 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255200 5265 Fabidae View MSA
124073302 5270 Rosid View MSA
123750556 5271 Pentapetalae View MSA
122792038 5272 Eudicot View MSA
122049890 5273 Angiosperm View MSA
121348658 5274 Embryophyte View MSA
123426031 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.39595 0.0 12.5474   High
cufflinks 2.65739 0.0 8.1105    
cufflinks 10.7056 0.0 28.6615   High
cufflinks 0.678271 0.0 2.4234    
cufflinks 0.85395 0.0 2.99729    
cufflinks 1.53774 0.0 5.05784    
cufflinks 0.451017 0.0 1.65306   Low
cufflinks 0.978009 0.0 3.3917    
cufflinks 0.690787 0.0 2.46309    
cufflinks 0.802        
cufflinks 0.013     Low Low
cufflinks 10.468     High High
cufflinks 1.018        
cufflinks 0.618        
cufflinks 0.038     Low Low
cufflinks 2.627        
cufflinks 0.426        
cufflinks 0.701        
cufflinks 2.138        
cufflinks 2.877        
cufflinks 0.044     Low Low
cufflinks 3.482        
cufflinks 4.046        
cufflinks 0.088       Low
cufflinks 2.614        
cufflinks 0.234        

0 Strain