Gene : Glyma.03G070600 G. max Wm82.a2.v1
Defline:  (1 of 2) 5.4.4.2 - Isochorismate synthase / Isochorismate synthetase Genomic Order:  706
Name:  ? Glyma.03G070600 Secondary Identifier:  ? PAC:30518036
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5837 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G070600 0.5kb upstream 0.5kb upstream 15052 true Chr03: 16838408-16853459 Glycine max
Glyma.03G070600 0.5kb upstream 0.5kb upstream 500 false Chr03: 16852960-16853459 Glycine max
Glyma.03G070600 0.5kb downstream 0.5kb downstream 15052 true Chr03: 16837908-16852959 Glycine max
Glyma.03G070600 0.5kb downstream 0.5kb downstream 500 false Chr03: 16837908-16838407 Glycine max
Glyma.03G070600 1.0kb upstream 1.0kb upstream 15552 true Chr03: 16838408-16853959 Glycine max
Glyma.03G070600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16852960-16853959 Glycine max
Glyma.03G070600 1.0kb downstream 1.0kb downstream 15552 true Chr03: 16837408-16852959 Glycine max
Glyma.03G070600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16837408-16838407 Glycine max
Glyma.03G070600 2.0kb upstream 2.0kb upstream 16552 true Chr03: 16838408-16854959 Glycine max
Glyma.03G070600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16852960-16854959 Glycine max
Glyma.03G070600 2.0kb downstream 2.0kb downstream 16552 true Chr03: 16836408-16852959 Glycine max
Glyma.03G070600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16836408-16838407 Glycine max
Glyma.03G070600 5.0kb upstream 5.0kb upstream 19552 true Chr03: 16838408-16857959 Glycine max
Glyma.03G070600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16852960-16857959 Glycine max
Glyma.03G070600 5.0kb downstream 5.0kb downstream 19552 true Chr03: 16833408-16852959 Glycine max
Glyma.03G070600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16833408-16838407 Glycine max
Glyma.03G070600 10.0kb upstream 10.0kb upstream 24552 true Chr03: 16838408-16862959 Glycine max
Glyma.03G070600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16852960-16862959 Glycine max
Glyma.03G070600 10.0kb downstream 10.0kb downstream 24552 true Chr03: 16828408-16852959 Glycine max
Glyma.03G070600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16828408-16838407 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306952 5265 Fabidae View MSA
124062909 5270 Rosid View MSA
123737646 5271 Pentapetalae View MSA
122790001 5272 Eudicot View MSA
122045851 5273 Angiosperm View MSA
121310517 5274 Embryophyte View MSA
123347980 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.61284 0.0 14.3943    
cufflinks 10.3926 0.0 48.7464   High
cufflinks 2.67931 0.0 13.0522    
cufflinks 0.762346 0.0 6.45017    
cufflinks 0.449992 0.0 2.84572    
cufflinks 0.357142 0.0 2.78944    
cufflinks 0.767867 0.0 7.21897    
cufflinks 2.38667 0.0 15.1647    
cufflinks 0.229023 0.0 1.92004 Low Low
cufflinks 0.067     Low  
cufflinks 0.001     Low Low
cufflinks 0.106     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.261        
cufflinks 0.007     Low  
cufflinks 0.098     Low  
cufflinks 0.332       High
cufflinks 0.44       High
cufflinks 0.004     Low  
cufflinks 0.351       High
cufflinks 0.309        
cufflinks 0.001     Low Low
cufflinks 0.317        
cufflinks 0.003     Low  

0 Strain