Gene : Glyma.02G114000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13634 - RIBOSOME BIOGENESIS PROTEIN BRIX Genomic Order:  1140
Name:  ? Glyma.02G114000 Secondary Identifier:  ? PAC:30506550
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G114000 0.5kb upstream 0.5kb upstream 5751 true Chr02: 11072814-11078564 Glycine max
Glyma.02G114000 0.5kb upstream 0.5kb upstream 500 false Chr02: 11072814-11073313 Glycine max
Glyma.02G114000 0.5kb downstream 0.5kb downstream 5751 true Chr02: 11073314-11079064 Glycine max
Glyma.02G114000 0.5kb downstream 0.5kb downstream 500 false Chr02: 11078565-11079064 Glycine max
Glyma.02G114000 1.0kb upstream 1.0kb upstream 6251 true Chr02: 11072314-11078564 Glycine max
Glyma.02G114000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11072314-11073313 Glycine max
Glyma.02G114000 1.0kb downstream 1.0kb downstream 6251 true Chr02: 11073314-11079564 Glycine max
Glyma.02G114000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11078565-11079564 Glycine max
Glyma.02G114000 2.0kb upstream 2.0kb upstream 7251 true Chr02: 11071314-11078564 Glycine max
Glyma.02G114000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11071314-11073313 Glycine max
Glyma.02G114000 2.0kb downstream 2.0kb downstream 7251 true Chr02: 11073314-11080564 Glycine max
Glyma.02G114000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11078565-11080564 Glycine max
Glyma.02G114000 5.0kb upstream 5.0kb upstream 10251 true Chr02: 11068314-11078564 Glycine max
Glyma.02G114000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11068314-11073313 Glycine max
Glyma.02G114000 5.0kb downstream 5.0kb downstream 10251 true Chr02: 11073314-11083564 Glycine max
Glyma.02G114000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11078565-11083564 Glycine max
Glyma.02G114000 10.0kb upstream 10.0kb upstream 15251 true Chr02: 11063314-11078564 Glycine max
Glyma.02G114000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11063314-11073313 Glycine max
Glyma.02G114000 10.0kb downstream 10.0kb downstream 15251 true Chr02: 11073314-11088564 Glycine max
Glyma.02G114000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11078565-11088564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030383 5273 Angiosperm View MSA
122241998 5265 Fabidae Singleton cluster - no MSA
123986769 5270 Rosid Singleton cluster - no MSA
123562096 5271 Pentapetalae Singleton cluster - no MSA
122596884 5272 Eudicot Singleton cluster - no MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.8227 0.0 24.2309    
cufflinks 3.41896 0.0 14.2631   Low
cufflinks 2.86964 0.0 12.4765   Low
cufflinks 5.09909 0.0 22.5401    
cufflinks 6.28861 0.0 21.8806    
cufflinks 4.5951 0.0 17.4536    
cufflinks 6.16567 0.0 21.5159    
cufflinks 6.69971 0.0 26.4347   High
cufflinks 4.12825 0.0 19.3073    
cufflinks 0.435        
cufflinks 0.056       Low
cufflinks 0.244        
cufflinks 0.733       High
cufflinks 0.884       High
cufflinks 0.182        
cufflinks 0.332        
cufflinks 0.2        
cufflinks 0.323        
cufflinks 0.381        
cufflinks 0.267        
cufflinks 0.114       Low
cufflinks 0.283        
cufflinks 0.359        
cufflinks 0.099       Low
cufflinks 0.294        
cufflinks 0.179        

0 Strain