Gene : Glyma.02G202400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12775 - PROTEIN C20ORF43 HOMOLOG Genomic Order:  2024
Name:  ? Glyma.02G202400 Secondary Identifier:  ? PAC:30506916
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G202400 0.5kb upstream 0.5kb upstream 2344 true Chr02: 38743650-38745993 Glycine max
Glyma.02G202400 0.5kb upstream 0.5kb upstream 500 false Chr02: 38745494-38745993 Glycine max
Glyma.02G202400 0.5kb downstream 0.5kb downstream 2344 true Chr02: 38743150-38745493 Glycine max
Glyma.02G202400 0.5kb downstream 0.5kb downstream 500 false Chr02: 38743150-38743649 Glycine max
Glyma.02G202400 1.0kb upstream 1.0kb upstream 2844 true Chr02: 38743650-38746493 Glycine max
Glyma.02G202400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38745494-38746493 Glycine max
Glyma.02G202400 1.0kb downstream 1.0kb downstream 2844 true Chr02: 38742650-38745493 Glycine max
Glyma.02G202400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38742650-38743649 Glycine max
Glyma.02G202400 2.0kb upstream 2.0kb upstream 3844 true Chr02: 38743650-38747493 Glycine max
Glyma.02G202400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38745494-38747493 Glycine max
Glyma.02G202400 2.0kb downstream 2.0kb downstream 3844 true Chr02: 38741650-38745493 Glycine max
Glyma.02G202400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38741650-38743649 Glycine max
Glyma.02G202400 5.0kb upstream 5.0kb upstream 6844 true Chr02: 38743650-38750493 Glycine max
Glyma.02G202400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38745494-38750493 Glycine max
Glyma.02G202400 5.0kb downstream 5.0kb downstream 6844 true Chr02: 38738650-38745493 Glycine max
Glyma.02G202400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38738650-38743649 Glycine max
Glyma.02G202400 10.0kb upstream 10.0kb upstream 11844 true Chr02: 38743650-38755493 Glycine max
Glyma.02G202400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38745494-38755493 Glycine max
Glyma.02G202400 10.0kb downstream 10.0kb downstream 11844 true Chr02: 38733650-38745493 Glycine max
Glyma.02G202400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38733650-38743649 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308220 5265 Fabidae View MSA
124066786 5270 Rosid View MSA
123747269 5271 Pentapetalae View MSA
122787080 5272 Eudicot View MSA
122046209 5273 Angiosperm View MSA
121350063 5274 Embryophyte View MSA
123426844 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4139 0.0 37.5934    
cufflinks 12.2538 0.0 42.8275    
cufflinks 16.7463 0.0 53.8639   High
cufflinks 11.4852 0.0 36.5536    
cufflinks 12.3273 0.0 42.9445    
cufflinks 13.4567 0.0 46.6347    
cufflinks 18.1729 0.0 53.9132   High
cufflinks 11.9843 0.0 36.472    
cufflinks 11.9241 0.0 38.0431    
cufflinks 4.132       Low
cufflinks 6.918     High  
cufflinks 6.087        
cufflinks 3.924       Low
cufflinks 4.061       Low
cufflinks 5.133        
cufflinks 6.754        
cufflinks 5.366        
cufflinks 6.209        
cufflinks 6.969        
cufflinks 6.807        
cufflinks 5.699        
cufflinks 6.377        
cufflinks 5.372        
cufflinks 7.022     High High
cufflinks 7.029     High High
cufflinks 5.302        

0 Strain