Gene : Glyma.02G199100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12300//PTHR12300:SF44 - HVA22-LIKE PROTEINS Genomic Order:  1991
Name:  ? Glyma.02G199100 Secondary Identifier:  ? PAC:30508551
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G199100 0.5kb upstream 0.5kb upstream 4880 true Chr02: 38114569-38119448 Glycine max
Glyma.02G199100 0.5kb upstream 0.5kb upstream 500 false Chr02: 38118949-38119448 Glycine max
Glyma.02G199100 0.5kb downstream 0.5kb downstream 4880 true Chr02: 38114069-38118948 Glycine max
Glyma.02G199100 0.5kb downstream 0.5kb downstream 500 false Chr02: 38114069-38114568 Glycine max
Glyma.02G199100 1.0kb upstream 1.0kb upstream 5380 true Chr02: 38114569-38119948 Glycine max
Glyma.02G199100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38118949-38119948 Glycine max
Glyma.02G199100 1.0kb downstream 1.0kb downstream 5380 true Chr02: 38113569-38118948 Glycine max
Glyma.02G199100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38113569-38114568 Glycine max
Glyma.02G199100 2.0kb upstream 2.0kb upstream 6380 true Chr02: 38114569-38120948 Glycine max
Glyma.02G199100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38118949-38120948 Glycine max
Glyma.02G199100 2.0kb downstream 2.0kb downstream 6380 true Chr02: 38112569-38118948 Glycine max
Glyma.02G199100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38112569-38114568 Glycine max
Glyma.02G199100 5.0kb upstream 5.0kb upstream 9380 true Chr02: 38114569-38123948 Glycine max
Glyma.02G199100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38118949-38123948 Glycine max
Glyma.02G199100 5.0kb downstream 5.0kb downstream 9380 true Chr02: 38109569-38118948 Glycine max
Glyma.02G199100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38109569-38114568 Glycine max
Glyma.02G199100 10.0kb upstream 10.0kb upstream 14380 true Chr02: 38114569-38128948 Glycine max
Glyma.02G199100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38118949-38128948 Glycine max
Glyma.02G199100 10.0kb downstream 10.0kb downstream 14380 true Chr02: 38104569-38118948 Glycine max
Glyma.02G199100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38104569-38114568 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314306 5265 Fabidae View MSA
124074738 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.141555 0.0 0.562621 Low  
cufflinks 0.227051 0.0 0.884707 Low  
cufflinks 20.0856 0.0 59.9028   High
cufflinks 0.221998 0.0 0.865453    
cufflinks 0.309952 0.0 1.57756    
cufflinks 5.30217 0.0 20.5049   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.780657 0.0 3.67179    
cufflinks 0.35339 0.0 1.70166    
cufflinks 0.166        
cufflinks 0.129        
cufflinks 0.826       High
cufflinks 0.09     Low  
cufflinks 0.027     Low  
cufflinks 0.055        
cufflinks 0.035     Low  
cufflinks 0.078        
cufflinks 0.887       High
cufflinks 0.02     Low Low
cufflinks 0.047     Low  
cufflinks 0.122        
cufflinks 0.032     Low  
cufflinks 0.014     Low Low
cufflinks 0.077        
cufflinks 0.033     Low  
cufflinks 0.082        

0 Strain