Gene : Glyma.02G260100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22950//PTHR22950:SF323 - AMINO ACID TRANSPORTER Genomic Order:  2601
Name:  ? Glyma.02G260100 Secondary Identifier:  ? PAC:30506576
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G260100 0.5kb upstream 0.5kb upstream 4506 true Chr02: 44684684-44689189 Glycine max
Glyma.02G260100 0.5kb upstream 0.5kb upstream 500 false Chr02: 44688690-44689189 Glycine max
Glyma.02G260100 0.5kb downstream 0.5kb downstream 4506 true Chr02: 44684184-44688689 Glycine max
Glyma.02G260100 0.5kb downstream 0.5kb downstream 500 false Chr02: 44684184-44684683 Glycine max
Glyma.02G260100 1.0kb upstream 1.0kb upstream 5006 true Chr02: 44684684-44689689 Glycine max
Glyma.02G260100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44688690-44689689 Glycine max
Glyma.02G260100 1.0kb downstream 1.0kb downstream 5006 true Chr02: 44683684-44688689 Glycine max
Glyma.02G260100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44683684-44684683 Glycine max
Glyma.02G260100 2.0kb upstream 2.0kb upstream 6006 true Chr02: 44684684-44690689 Glycine max
Glyma.02G260100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44688690-44690689 Glycine max
Glyma.02G260100 2.0kb downstream 2.0kb downstream 6006 true Chr02: 44682684-44688689 Glycine max
Glyma.02G260100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44682684-44684683 Glycine max
Glyma.02G260100 5.0kb upstream 5.0kb upstream 9006 true Chr02: 44684684-44693689 Glycine max
Glyma.02G260100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44688690-44693689 Glycine max
Glyma.02G260100 5.0kb downstream 5.0kb downstream 9006 true Chr02: 44679684-44688689 Glycine max
Glyma.02G260100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44679684-44684683 Glycine max
Glyma.02G260100 10.0kb upstream 10.0kb upstream 14006 true Chr02: 44684684-44698689 Glycine max
Glyma.02G260100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44688690-44698689 Glycine max
Glyma.02G260100 10.0kb downstream 10.0kb downstream 14006 true Chr02: 44674684-44688689 Glycine max
Glyma.02G260100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44674684-44684683 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311499 5265 Fabidae View MSA
124061785 5270 Rosid View MSA
123738640 5271 Pentapetalae View MSA
122795353 5272 Eudicot View MSA
122048665 5273 Angiosperm View MSA
121311064 5274 Embryophyte View MSA
123428317 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48646 0.0 10.2291    
cufflinks 2.93911 0.0 8.80379   Low
cufflinks 6.26312 0.0 17.2032    
cufflinks 14.8639 0.0 39.6699   High
cufflinks 9.04616 0.0 24.3534    
cufflinks 11.2172 0.0 29.9793    
cufflinks 20.2373 0.0 54.3834   High
cufflinks 3.99486 0.0 11.5196    
cufflinks 3.35272 0.0 9.85582    
cufflinks 5.748       High
cufflinks 0.228       Low
cufflinks 7.312     High High
cufflinks 3.372        
cufflinks 1.935        
cufflinks 0.762        
cufflinks 4.118        
cufflinks 0.879        
cufflinks 6.345       High
cufflinks 3.051        
cufflinks 1.031        
cufflinks 0.683        
cufflinks 1.173        
cufflinks 1.39        
cufflinks 0.205       Low
cufflinks 2.382        
cufflinks 0.521        

0 Strain