Gene : Glyma.02G275300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22792:SF68 - LA-RELATED PROTEIN 1A Genomic Order:  2753
Name:  ? Glyma.02G275300 Secondary Identifier:  ? PAC:30508383
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G275300 0.5kb upstream 0.5kb upstream 10251 true Chr02: 45819221-45829471 Glycine max
Glyma.02G275300 0.5kb upstream 0.5kb upstream 500 false Chr02: 45828972-45829471 Glycine max
Glyma.02G275300 0.5kb downstream 0.5kb downstream 10251 true Chr02: 45818721-45828971 Glycine max
Glyma.02G275300 0.5kb downstream 0.5kb downstream 500 false Chr02: 45818721-45819220 Glycine max
Glyma.02G275300 1.0kb upstream 1.0kb upstream 10751 true Chr02: 45819221-45829971 Glycine max
Glyma.02G275300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45828972-45829971 Glycine max
Glyma.02G275300 1.0kb downstream 1.0kb downstream 10751 true Chr02: 45818221-45828971 Glycine max
Glyma.02G275300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45818221-45819220 Glycine max
Glyma.02G275300 2.0kb upstream 2.0kb upstream 11751 true Chr02: 45819221-45830971 Glycine max
Glyma.02G275300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45828972-45830971 Glycine max
Glyma.02G275300 2.0kb downstream 2.0kb downstream 11751 true Chr02: 45817221-45828971 Glycine max
Glyma.02G275300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45817221-45819220 Glycine max
Glyma.02G275300 5.0kb upstream 5.0kb upstream 14751 true Chr02: 45819221-45833971 Glycine max
Glyma.02G275300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45828972-45833971 Glycine max
Glyma.02G275300 5.0kb downstream 5.0kb downstream 14751 true Chr02: 45814221-45828971 Glycine max
Glyma.02G275300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45814221-45819220 Glycine max
Glyma.02G275300 10.0kb upstream 10.0kb upstream 19751 true Chr02: 45819221-45838971 Glycine max
Glyma.02G275300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45828972-45838971 Glycine max
Glyma.02G275300 10.0kb downstream 10.0kb downstream 19751 true Chr02: 45809221-45828971 Glycine max
Glyma.02G275300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45809221-45819220 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302263 5265 Fabidae View MSA
124070608 5270 Rosid View MSA
123740397 5271 Pentapetalae View MSA
122794602 5272 Eudicot View MSA
122048453 5273 Angiosperm View MSA
121348464 5274 Embryophyte View MSA
123425641 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.03158 0.0 24.1014    
cufflinks 11.3655 0.0 30.4711    
cufflinks 8.61148 0.0 22.9779    
cufflinks 15.571 0.0 42.4461   High
cufflinks 10.9034 0.0 29.1869    
cufflinks 4.48725 0.0 12.2056   Low
cufflinks 18.7519 0.0 51.7406   High
cufflinks 10.5834 0.0 28.3228    
cufflinks 9.75178 0.0 26.0501    
cufflinks 4.176        
cufflinks 0.605       Low
cufflinks 5.387        
cufflinks 5.122        
cufflinks 6.043       High
cufflinks 1.867        
cufflinks 2.53        
cufflinks 4.041        
cufflinks 6.49       High
cufflinks 6.745       High
cufflinks 2.828        
cufflinks 1.031       Low
cufflinks 3.145        
cufflinks 3.679        
cufflinks 0.978       Low
cufflinks 2.775        
cufflinks 2.369        

0 Strain