Gene : Glyma.18G293800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  2938
Name:  ? Glyma.18G293800 Secondary Identifier:  ? PAC:30554906
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRIGLSYN-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G293800 0.5kb upstream 0.5kb upstream 4817 true Chr18: 57166496-57171312 Glycine max
Glyma.18G293800 0.5kb upstream 0.5kb upstream 500 false Chr18: 57170813-57171312 Glycine max
Glyma.18G293800 0.5kb downstream 0.5kb downstream 4817 true Chr18: 57165996-57170812 Glycine max
Glyma.18G293800 0.5kb downstream 0.5kb downstream 500 false Chr18: 57165996-57166495 Glycine max
Glyma.18G293800 1.0kb upstream 1.0kb upstream 5317 true Chr18: 57166496-57171812 Glycine max
Glyma.18G293800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57170813-57171812 Glycine max
Glyma.18G293800 1.0kb downstream 1.0kb downstream 5317 true Chr18: 57165496-57170812 Glycine max
Glyma.18G293800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57165496-57166495 Glycine max
Glyma.18G293800 2.0kb upstream 2.0kb upstream 6317 true Chr18: 57166496-57172812 Glycine max
Glyma.18G293800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57170813-57172812 Glycine max
Glyma.18G293800 2.0kb downstream 2.0kb downstream 6317 true Chr18: 57164496-57170812 Glycine max
Glyma.18G293800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57164496-57166495 Glycine max
Glyma.18G293800 5.0kb upstream 5.0kb upstream 9317 true Chr18: 57166496-57175812 Glycine max
Glyma.18G293800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57170813-57175812 Glycine max
Glyma.18G293800 5.0kb downstream 5.0kb downstream 9317 true Chr18: 57161496-57170812 Glycine max
Glyma.18G293800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57161496-57166495 Glycine max
Glyma.18G293800 10.0kb upstream 10.0kb upstream 14317 true Chr18: 57166496-57180812 Glycine max
Glyma.18G293800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57170813-57180812 Glycine max
Glyma.18G293800 10.0kb downstream 10.0kb downstream 14317 true Chr18: 57156496-57170812 Glycine max
Glyma.18G293800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57156496-57166495 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314328 5265 Fabidae View MSA
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0737 0.0 68.9398    
cufflinks 12.1539 0.0 54.734    
cufflinks 19.3992 0.0 74.1469   High
cufflinks 13.3204 0.0 59.2811    
cufflinks 5.38027 0.0 30.9037   Low
cufflinks 5.31189 0.0 29.5668   Low
cufflinks 11.1843 0.0 50.7973    
cufflinks 12.4059 0.0 54.8574    
cufflinks 5.21473 0.0 23.3687   Low
cufflinks 0.599        
cufflinks 0.46        
cufflinks 1.319       High
cufflinks 0.34        
cufflinks 0.361        
cufflinks 0.241       Low
cufflinks 0.91        
cufflinks 0.203       Low
cufflinks 1.298       High
cufflinks 0.65        
cufflinks 1.229       High
cufflinks 0.58        
cufflinks 1.163       High
cufflinks 0.919        
cufflinks 0.746        
cufflinks 1.114        
cufflinks 0.266       Low

0 Strain