Gene : Glyma.02G051400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13233:SF2 - SMAD/FHA DOMAIN-CONTAINING PROTEIN Genomic Order:  514
Name:  ? Glyma.02G051400 Secondary Identifier:  ? PAC:30508556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G051400 0.5kb upstream 0.5kb upstream 4875 true Chr02: 4655449-4660323 Glycine max
Glyma.02G051400 0.5kb upstream 0.5kb upstream 500 false Chr02: 4659824-4660323 Glycine max
Glyma.02G051400 0.5kb downstream 0.5kb downstream 4875 true Chr02: 4654949-4659823 Glycine max
Glyma.02G051400 0.5kb downstream 0.5kb downstream 500 false Chr02: 4654949-4655448 Glycine max
Glyma.02G051400 1.0kb upstream 1.0kb upstream 5375 true Chr02: 4655449-4660823 Glycine max
Glyma.02G051400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4659824-4660823 Glycine max
Glyma.02G051400 1.0kb downstream 1.0kb downstream 5375 true Chr02: 4654449-4659823 Glycine max
Glyma.02G051400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4654449-4655448 Glycine max
Glyma.02G051400 2.0kb upstream 2.0kb upstream 6375 true Chr02: 4655449-4661823 Glycine max
Glyma.02G051400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4659824-4661823 Glycine max
Glyma.02G051400 2.0kb downstream 2.0kb downstream 6375 true Chr02: 4653449-4659823 Glycine max
Glyma.02G051400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4653449-4655448 Glycine max
Glyma.02G051400 5.0kb upstream 5.0kb upstream 9375 true Chr02: 4655449-4664823 Glycine max
Glyma.02G051400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4659824-4664823 Glycine max
Glyma.02G051400 5.0kb downstream 5.0kb downstream 9375 true Chr02: 4650449-4659823 Glycine max
Glyma.02G051400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4650449-4655448 Glycine max
Glyma.02G051400 10.0kb upstream 10.0kb upstream 14375 true Chr02: 4655449-4669823 Glycine max
Glyma.02G051400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4659824-4669823 Glycine max
Glyma.02G051400 10.0kb downstream 10.0kb downstream 14375 true Chr02: 4645449-4659823 Glycine max
Glyma.02G051400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4645449-4655448 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311481 5265 Fabidae View MSA
124071163 5270 Rosid View MSA
123743662 5271 Pentapetalae View MSA
122794293 5272 Eudicot View MSA
122042078 5273 Angiosperm View MSA
121309918 5274 Embryophyte View MSA
123347549 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.38364 0.0 9.59962    
cufflinks 2.34969 0.0 9.39145    
cufflinks 3.14209 0.0 13.6706   High
cufflinks 1.74832 0.0 5.85479    
cufflinks 1.26971 0.0 6.24002   Low
cufflinks 1.4068 0.0 5.05122   Low
cufflinks 2.93487 0.0 10.9435   High
cufflinks 1.62442 0.0 7.43445    
cufflinks 1.72309 0.0 5.8613    
cufflinks 0.385        
cufflinks 0.393        
cufflinks 1.112        
cufflinks 0.443        
cufflinks 0.458        
cufflinks 0.369        
cufflinks 1.442        
cufflinks 0.121       Low
cufflinks 1.28        
cufflinks 1.067        
cufflinks 1.91       High
cufflinks 0.326        
cufflinks 1.758       High
cufflinks 1.23        
cufflinks 0.446        
cufflinks 1.729       High
cufflinks 0.243       Low

0 Strain