Gene : Glyma.02G042600 G. max Wm82.a2.v1
Defline:  (1 of 65) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  426
Name:  ? Glyma.02G042600 Secondary Identifier:  ? PAC:30511098
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G042600 0.5kb upstream 0.5kb upstream 1448 true Chr02: 4001311-4002758 Glycine max
Glyma.02G042600 0.5kb upstream 0.5kb upstream 500 false Chr02: 4002259-4002758 Glycine max
Glyma.02G042600 0.5kb downstream 0.5kb downstream 1448 true Chr02: 4000811-4002258 Glycine max
Glyma.02G042600 0.5kb downstream 0.5kb downstream 500 false Chr02: 4000811-4001310 Glycine max
Glyma.02G042600 1.0kb upstream 1.0kb upstream 1948 true Chr02: 4001311-4003258 Glycine max
Glyma.02G042600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4002259-4003258 Glycine max
Glyma.02G042600 1.0kb downstream 1.0kb downstream 1948 true Chr02: 4000311-4002258 Glycine max
Glyma.02G042600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4000311-4001310 Glycine max
Glyma.02G042600 2.0kb upstream 2.0kb upstream 2948 true Chr02: 4001311-4004258 Glycine max
Glyma.02G042600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4002259-4004258 Glycine max
Glyma.02G042600 2.0kb downstream 2.0kb downstream 2948 true Chr02: 3999311-4002258 Glycine max
Glyma.02G042600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3999311-4001310 Glycine max
Glyma.02G042600 5.0kb upstream 5.0kb upstream 5948 true Chr02: 4001311-4007258 Glycine max
Glyma.02G042600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4002259-4007258 Glycine max
Glyma.02G042600 5.0kb downstream 5.0kb downstream 5948 true Chr02: 3996311-4002258 Glycine max
Glyma.02G042600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3996311-4001310 Glycine max
Glyma.02G042600 10.0kb upstream 10.0kb upstream 10948 true Chr02: 4001311-4012258 Glycine max
Glyma.02G042600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4002259-4012258 Glycine max
Glyma.02G042600 10.0kb downstream 10.0kb downstream 10948 true Chr02: 3991311-4002258 Glycine max
Glyma.02G042600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3991311-4001310 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302082 5265 Fabidae View MSA
124069570 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.256126 0.0 1.00305   Low
cufflinks 0.201071 0.0 0.794033 Low Low
cufflinks 2.04606 0.0 7.15233    
cufflinks 0.792232 0.0 2.95073    
cufflinks 2.02587 0.0 7.12922    
cufflinks 12.164 0.0 34.214   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.688988 0.0 2.58138    
cufflinks 5.84224 0.0 18.0275   High
cufflinks 0.543       Low
cufflinks 1.589        
cufflinks 1.337        
cufflinks 2.718       High
cufflinks 0.885        
cufflinks 0.576       Low
cufflinks 1.889        
cufflinks 1.464        
cufflinks 0.517       Low
cufflinks 0.383       Low
cufflinks 2.009        
cufflinks 1.212        
cufflinks 1.596        
cufflinks 1.715        
cufflinks 1.913        
cufflinks 1.452        
cufflinks 1.313        

0 Strain