Gene : Glyma.02G078700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  787
Name:  ? Glyma.02G078700 Secondary Identifier:  ? PAC:30508081
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6358 Glycine max pathologic  
Gmax PWY-6363 Glycine max pathologic  
Gmax PWY-6364 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G078700 0.5kb upstream 0.5kb upstream 8450 true Chr02: 6782221-6790670 Glycine max
Glyma.02G078700 0.5kb upstream 0.5kb upstream 500 false Chr02: 6790171-6790670 Glycine max
Glyma.02G078700 0.5kb downstream 0.5kb downstream 8450 true Chr02: 6781721-6790170 Glycine max
Glyma.02G078700 0.5kb downstream 0.5kb downstream 500 false Chr02: 6781721-6782220 Glycine max
Glyma.02G078700 1.0kb upstream 1.0kb upstream 8950 true Chr02: 6782221-6791170 Glycine max
Glyma.02G078700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6790171-6791170 Glycine max
Glyma.02G078700 1.0kb downstream 1.0kb downstream 8950 true Chr02: 6781221-6790170 Glycine max
Glyma.02G078700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6781221-6782220 Glycine max
Glyma.02G078700 2.0kb upstream 2.0kb upstream 9950 true Chr02: 6782221-6792170 Glycine max
Glyma.02G078700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6790171-6792170 Glycine max
Glyma.02G078700 2.0kb downstream 2.0kb downstream 9950 true Chr02: 6780221-6790170 Glycine max
Glyma.02G078700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6780221-6782220 Glycine max
Glyma.02G078700 5.0kb upstream 5.0kb upstream 12950 true Chr02: 6782221-6795170 Glycine max
Glyma.02G078700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6790171-6795170 Glycine max
Glyma.02G078700 5.0kb downstream 5.0kb downstream 12950 true Chr02: 6777221-6790170 Glycine max
Glyma.02G078700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6777221-6782220 Glycine max
Glyma.02G078700 10.0kb upstream 10.0kb upstream 17950 true Chr02: 6782221-6800170 Glycine max
Glyma.02G078700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6790171-6800170 Glycine max
Glyma.02G078700 10.0kb downstream 10.0kb downstream 17950 true Chr02: 6772221-6790170 Glycine max
Glyma.02G078700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6772221-6782220 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313344 5265 Fabidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.81255 0.0 10.4791    
cufflinks 3.02153 0.0 10.9736    
cufflinks 2.02984 0.0 8.27863   Low
cufflinks 2.82458 0.0 10.4353    
cufflinks 2.08994 0.0 8.5823   Low
cufflinks 7.08037 0.0 22.549   High
cufflinks 4.77341 0.0 16.2898   High
cufflinks 3.33332 0.0 11.7638    
cufflinks 2.74031 0.0 10.2503    
cufflinks 0.677        
cufflinks 1.1       High
cufflinks 0.492        
cufflinks 0.483        
cufflinks 0.363       Low
cufflinks 0.27       Low
cufflinks 0.456        
cufflinks 0.519        
cufflinks 0.567        
cufflinks 0.487        
cufflinks 0.54        
cufflinks 0.929       High
cufflinks 0.529        
cufflinks 0.518        
cufflinks 1.215       High
cufflinks 0.436        
cufflinks 0.653        

0 Strain