Gene : Glyma.02G075600 G. max Wm82.a2.v1

Defline:  (1 of 25) PF00069//PF00954//PF01453 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) Genomic Order:  756
Name:  ? Glyma.02G075600 Secondary Identifier:  ? PAC:30508613

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G075600 0.5kb upstream 0.5kb upstream 3011 true Chr02: 6616676-6619686 Glycine max
Glyma.02G075600 0.5kb upstream 0.5kb upstream 500 false Chr02: 6619187-6619686 Glycine max
Glyma.02G075600 0.5kb downstream 0.5kb downstream 3011 true Chr02: 6616176-6619186 Glycine max
Glyma.02G075600 0.5kb downstream 0.5kb downstream 500 false Chr02: 6616176-6616675 Glycine max
Glyma.02G075600 1.0kb upstream 1.0kb upstream 3511 true Chr02: 6616676-6620186 Glycine max
Glyma.02G075600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6619187-6620186 Glycine max
Glyma.02G075600 1.0kb downstream 1.0kb downstream 3511 true Chr02: 6615676-6619186 Glycine max
Glyma.02G075600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6615676-6616675 Glycine max
Glyma.02G075600 2.0kb upstream 2.0kb upstream 4511 true Chr02: 6616676-6621186 Glycine max
Glyma.02G075600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6619187-6621186 Glycine max
Glyma.02G075600 2.0kb downstream 2.0kb downstream 4511 true Chr02: 6614676-6619186 Glycine max
Glyma.02G075600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6614676-6616675 Glycine max
Glyma.02G075600 5.0kb upstream 5.0kb upstream 7511 true Chr02: 6616676-6624186 Glycine max
Glyma.02G075600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6619187-6624186 Glycine max
Glyma.02G075600 5.0kb downstream 5.0kb downstream 7511 true Chr02: 6611676-6619186 Glycine max
Glyma.02G075600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6611676-6616675 Glycine max
Glyma.02G075600 10.0kb upstream 10.0kb upstream 12511 true Chr02: 6616676-6629186 Glycine max
Glyma.02G075600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6619187-6629186 Glycine max
Glyma.02G075600 10.0kb downstream 10.0kb downstream 12511 true Chr02: 6606676-6619186 Glycine max
Glyma.02G075600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6606676-6616675 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301413 5265 Fabidae View MSA
124067025 5270 Rosid View MSA
123740276 5271 Pentapetalae View MSA
122790821 5272 Eudicot View MSA
122043483 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.08349 0.0 11.5309   High
cufflinks 0.817635 0.0 2.84458    
cufflinks 1.00925 0.0 3.43402    
cufflinks 1.07586 0.0 3.63016    
cufflinks 0.882938 0.0 3.03851    
cufflinks 1.63797 0.0 5.21733    
cufflinks 0.600331 0.0 2.13557   Low
cufflinks 1.79198 0.0 5.64938    
cufflinks 0.897118 0.0 3.08797    
cufflinks 1.766        
cufflinks 0.433       Low
cufflinks 2.261        
cufflinks 0.806        
cufflinks 0.625       Low
cufflinks 0.835        
cufflinks 1.789        
cufflinks 2.819       High
cufflinks 2.199        
cufflinks 1.281        
cufflinks 1.521        
cufflinks 0.494       Low
cufflinks 2.211        
cufflinks 2.363       High
cufflinks 0.63       Low
cufflinks 1.682        
cufflinks 0.502       Low

0 Strain