Gene : Glyma.01G199700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11715:SF1 - GLYCINE CLEAVAGE SYSTEM H PROTEIN 3, MITOCHONDRIAL Genomic Order:  1997
Name:  ? Glyma.01G199700 Secondary Identifier:  ? PAC:30541735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G199700 0.5kb upstream 0.5kb upstream 2324 true Chr01: 53347395-53349718 Glycine max
Glyma.01G199700 0.5kb upstream 0.5kb upstream 500 false Chr01: 53347395-53347894 Glycine max
Glyma.01G199700 0.5kb downstream 0.5kb downstream 2324 true Chr01: 53347895-53350218 Glycine max
Glyma.01G199700 0.5kb downstream 0.5kb downstream 500 false Chr01: 53349719-53350218 Glycine max
Glyma.01G199700 1.0kb upstream 1.0kb upstream 2824 true Chr01: 53346895-53349718 Glycine max
Glyma.01G199700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 53346895-53347894 Glycine max
Glyma.01G199700 1.0kb downstream 1.0kb downstream 2824 true Chr01: 53347895-53350718 Glycine max
Glyma.01G199700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 53349719-53350718 Glycine max
Glyma.01G199700 2.0kb upstream 2.0kb upstream 3824 true Chr01: 53345895-53349718 Glycine max
Glyma.01G199700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 53345895-53347894 Glycine max
Glyma.01G199700 2.0kb downstream 2.0kb downstream 3824 true Chr01: 53347895-53351718 Glycine max
Glyma.01G199700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 53349719-53351718 Glycine max
Glyma.01G199700 5.0kb upstream 5.0kb upstream 6824 true Chr01: 53342895-53349718 Glycine max
Glyma.01G199700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 53342895-53347894 Glycine max
Glyma.01G199700 5.0kb downstream 5.0kb downstream 6824 true Chr01: 53347895-53354718 Glycine max
Glyma.01G199700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 53349719-53354718 Glycine max
Glyma.01G199700 10.0kb upstream 10.0kb upstream 11824 true Chr01: 53337895-53349718 Glycine max
Glyma.01G199700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 53337895-53347894 Glycine max
Glyma.01G199700 10.0kb downstream 10.0kb downstream 11824 true Chr01: 53347895-53359718 Glycine max
Glyma.01G199700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 53349719-53359718 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301394 5265 Fabidae View MSA
124065363 5270 Rosid View MSA
123736891 5271 Pentapetalae View MSA
122788661 5272 Eudicot View MSA
122045381 5273 Angiosperm View MSA
121349488 5274 Embryophyte View MSA
123424429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.3374 0.0 355.708 High High
cufflinks 86.977 0.0 310.095 High High
cufflinks 13.6946 0.0 50.5706    
cufflinks 25.3534 0.0 84.8424 High  
cufflinks 7.12701 0.0 26.9355    
cufflinks 8.58256 0.0 30.6215    
cufflinks 31.0264 0.0 102.793 High  
cufflinks 15.8623 0.0 56.6476    
cufflinks 1.49772 0.0 8.36411   Low
cufflinks 14.324     High  
cufflinks 0.037     Low  
cufflinks 6.767        
cufflinks 0.004     Low Low
cufflinks 0.007     Low Low
cufflinks 0.037     Low  
cufflinks 79.777     High High
cufflinks 0.02     Low Low
cufflinks 8.615     High  
cufflinks 16.244     High  
cufflinks 89.013     High High
cufflinks 0.059     Low  
cufflinks 77.452     High High
cufflinks 67.012     High High
cufflinks 0.137        
cufflinks 85.811     High High
cufflinks 0.075        

0 Strain