Gene : Glyma.01G233700 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  2337
Name:  ? Glyma.01G233700 Secondary Identifier:  ? PAC:30542990
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6129 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G233700 0.5kb upstream 0.5kb upstream 4386 true Chr01: 56002555-56006940 Glycine max
Glyma.01G233700 0.5kb upstream 0.5kb upstream 500 false Chr01: 56006441-56006940 Glycine max
Glyma.01G233700 0.5kb downstream 0.5kb downstream 4386 true Chr01: 56002055-56006440 Glycine max
Glyma.01G233700 0.5kb downstream 0.5kb downstream 500 false Chr01: 56002055-56002554 Glycine max
Glyma.01G233700 1.0kb upstream 1.0kb upstream 4886 true Chr01: 56002555-56007440 Glycine max
Glyma.01G233700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56006441-56007440 Glycine max
Glyma.01G233700 1.0kb downstream 1.0kb downstream 4886 true Chr01: 56001555-56006440 Glycine max
Glyma.01G233700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56001555-56002554 Glycine max
Glyma.01G233700 2.0kb upstream 2.0kb upstream 5886 true Chr01: 56002555-56008440 Glycine max
Glyma.01G233700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56006441-56008440 Glycine max
Glyma.01G233700 2.0kb downstream 2.0kb downstream 5886 true Chr01: 56000555-56006440 Glycine max
Glyma.01G233700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56000555-56002554 Glycine max
Glyma.01G233700 5.0kb upstream 5.0kb upstream 8886 true Chr01: 56002555-56011440 Glycine max
Glyma.01G233700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56006441-56011440 Glycine max
Glyma.01G233700 5.0kb downstream 5.0kb downstream 8886 true Chr01: 55997555-56006440 Glycine max
Glyma.01G233700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55997555-56002554 Glycine max
Glyma.01G233700 10.0kb upstream 10.0kb upstream 13886 true Chr01: 56002555-56016440 Glycine max
Glyma.01G233700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56006441-56016440 Glycine max
Glyma.01G233700 10.0kb downstream 10.0kb downstream 13886 true Chr01: 55992555-56006440 Glycine max
Glyma.01G233700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55992555-56002554 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306673 5265 Fabidae View MSA
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.333 0.0 43.21    
cufflinks 5.50809 0.0 22.0207   Low
cufflinks 12.3449 0.0 45.5118    
cufflinks 7.80411 0.0 27.8635    
cufflinks 5.81053 0.0 23.1712   Low
cufflinks 14.0108 0.0 50.9763   High
cufflinks 12.2607 0.0 46.1914    
cufflinks 7.7362 0.0 27.7135    
cufflinks 5.86193 0.0 22.914   Low
cufflinks 1.184        
cufflinks 0.718        
cufflinks 1.547       High
cufflinks 1.257       High
cufflinks 1.215        
cufflinks 0.486       Low
cufflinks 0.669        
cufflinks 0.646        
cufflinks 1.614       High
cufflinks 0.918        
cufflinks 0.798        
cufflinks 0.727        
cufflinks 0.824        
cufflinks 0.694        
cufflinks 1.223        
cufflinks 0.817        
cufflinks 0.586       Low

0 Strain